RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 C22orf46C9J442 243 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 MOSP00540 346 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 RPL27AP46776 148 aaKnown RBP16.04■□□□□ 0.16
MSLN-205ENST00000563941 MFAP2P55001 183 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 LINC00305Q7Z4B0 112 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 FXYD5Q96DB9 178 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 TNFRSF19Q9NS68 423 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 SERF1AO75920 110 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 IGLV1-47P01700 117 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 CRYGCP07315 174 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 FAM87AP0C7U9 286 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 PRRX1P54821 245 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 SLC35B1P78383 322 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 PVRIGQ6DKI7 326 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 SERTAD4Q9NUC0 356 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 POLEQ07864 2286 aa16.04■□□□□ 0.16
MSLN-205ENST00000563941 SMIM27A0A1W2PRY6 76 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 PEX7O00628 323 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 CRYGBP07316 175 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 ESDP10768 282 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 TPPP2P59282 170 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 WDR73Q6P4I2 378 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 C19orf35Q6ZS72 473 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 NAT8BQ9UHF3 227 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 MT-ND6P03923 174 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 APELAP0DMC3 54 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 TMEM136Q6ZRR5 245 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 LINC01560Q8TB33 94 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 NAGKQ9UJ70 344 aa16.03■□□□□ 0.16
MSLN-205ENST00000563941 IGHV1-3A0A0C4DH29 117 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 ORM2P19652 201 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 CASP6P55212 293 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 PAFAH1B2P68402 229 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 Q0VG73 95 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 ZNF841Q6ZN19 808 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 BAGE3Q86Y29 109 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 BAGE2Q86Y30 109 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 OR1B1Q8NGR6 318 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 SIGLEC9Q9Y336 463 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 INSIG2Q9Y5U4 225 aa16.02■□□□□ 0.16
MSLN-205ENST00000563941 F2Z2F3 143 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 BUB1B-PAK6H3BSN5 160 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 SNRPCP09234 159 aaKnown RBP16.01■□□□□ 0.15
MSLN-205ENST00000563941 RANP62826 216 aaKnown RBP16.01■□□□□ 0.15
MSLN-205ENST00000563941 COX19Q49B96 90 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 LINC00469Q8N7U9 141 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 C22orf15Q8WYQ4 148 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 PERPQ96FX8 193 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 TRGV9Q99603 122 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 CLEC7AQ9BXN2 247 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 TRAV34A0A0B4J273 112 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 COMPP49747 757 aaPredicted RBP16.01■□□□□ 0.15
MSLN-205ENST00000563941 NDUFAF3Q9BU61 184 aa16.01■□□□□ 0.15
MSLN-205ENST00000563941 MALRD1Q5VYJ5 2156 aa16■□□□□ 0.15
MSLN-205ENST00000563941 CA1P00915 261 aaPredicted RBP16■□□□□ 0.15
MSLN-205ENST00000563941 AMY1AP04745 511 aa16■□□□□ 0.15
MSLN-205ENST00000563941 MRPL54Q6P161 138 aaKnown RBP16■□□□□ 0.15
MSLN-205ENST00000563941 MUC15Q8N387 334 aa16■□□□□ 0.15
MSLN-205ENST00000563941 IGHV3-21A0A0B4J1V1 117 aa16■□□□□ 0.15
MSLN-205ENST00000563941 FAM90A27PA6NNH2 459 aa16■□□□□ 0.15
MSLN-205ENST00000563941 COX7A1P24310 79 aa16■□□□□ 0.15
MSLN-205ENST00000563941 MYCNOSP40205 109 aa16■□□□□ 0.15
MSLN-205ENST00000563941 ASPHD1Q5U4P2 390 aa16■□□□□ 0.15
MSLN-205ENST00000563941 Q6ZWC4 215 aa16■□□□□ 0.15
MSLN-205ENST00000563941 TMEM116Q8NCL8 245 aa16■□□□□ 0.15
MSLN-205ENST00000563941 BEND2Q8NDZ0 799 aa16■□□□□ 0.15
MSLN-205ENST00000563941 STXBP6Q8NFX7 210 aa16■□□□□ 0.15
MSLN-205ENST00000563941 POLR3KQ9Y2Y1 108 aaPredicted RBP16■□□□□ 0.15
MSLN-205ENST00000563941 PPIAL4CA0A0B4J2A2 164 aa15.99■□□□□ 0.15
MSLN-205ENST00000563941 PPIAL4GP0DN37 164 aa15.99■□□□□ 0.15
MSLN-205ENST00000563941 GNG5P63218 68 aa15.99■□□□□ 0.15
MSLN-205ENST00000563941 FAM168AQ92567 244 aa15.99■□□□□ 0.15
MSLN-205ENST00000563941 GNB4Q9HAV0 340 aa15.99■□□□□ 0.15
MSLN-205ENST00000563941 IZUMO1RA6ND01 250 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 FAM231DQ6ZW35 169 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 LHFPL4Q7Z7J7 247 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 PPP1R27Q86WC6 154 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 SSBP3Q9BWW4 388 aaPredicted RBP15.98■□□□□ 0.15
MSLN-205ENST00000563941 CORTO00230 105 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 CD33P20138 364 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 GRNP28799 593 aaKnown RBP15.98■□□□□ 0.15
MSLN-205ENST00000563941 KIAA1644Q3SXP7 199 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 BLNKQ8WV28 456 aa15.98■□□□□ 0.15
MSLN-205ENST00000563941 ZNF705FA8MVS1 300 aaPredicted RBP15.97■□□□□ 0.15
MSLN-205ENST00000563941 TEX22C9J3V5 150 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 SIAH2O43255 324 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 HLA-DQA1P01909 254 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 ZNF705DP0CH99 300 aaPredicted RBP15.97■□□□□ 0.15
MSLN-205ENST00000563941 ZNF705BP0CI00 300 aaPredicted RBP15.97■□□□□ 0.15
MSLN-205ENST00000563941 RPEQ96AT9 228 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 MBD6Q96DN6 1003 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 HSPB9Q9BQS6 159 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 FBXL15Q9H469 300 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 F11RQ9Y624 299 aaKnown RBP15.97■□□□□ 0.15
MSLN-205ENST00000563941 HYPMO75409 117 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 RBP4P02753 201 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 SLC25A5P05141 298 aaKnown RBP15.97■□□□□ 0.15
MSLN-205ENST00000563941 TBX15Q96SF7 602 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 SAMD10Q9BYL1 202 aa15.97■□□□□ 0.15
MSLN-205ENST00000563941 EPDR1Q9UM22 224 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms