RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, human

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-223	ENST00000556772	TCRBV4S1A1T	A0A5B7	111 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	SNCG	O76070	127 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	GPX1	P07203	203 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	CCL3L1	P16619	93 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	PAX9	P55771	341 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	LOXL3	P58215	753 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	IL15RA	Q13261	267 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	AMMECR1L	Q6DCA0	310 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	C5orf30	Q96GV9	206 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	FOXC2	Q99958	501 aa		6.7	□□□□□ -1.34
NUMB-223	ENST00000556772	C19orf67	A6NJJ6	358 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	C15orf62	A8K5M9	175 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	FAM106CP	P0CH98	169 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	ZNF585B	Q52M93	769 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	PRR31	Q5SQ13	230 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	NEUROG1	Q92886	237 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	CHCHD1	Q96BP2	118 aa	Known RBP	6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	OTOR	Q9NRC9	128 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	LINC00312	Q9Y6C7	94 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	TRAV3	A0A0B4J244	114 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	AREG	P15514	252 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	LINC00205	P59089	165 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772		Q6P435	159 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	OR10W1	Q8NGF6	305 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	MEGF9	Q9H1U4	602 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	DOCK11	Q5JSL3	2073 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772		A0A1B0GV72	72 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	LINC00473	A8K010	186 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	PI4KA	P42356	2102 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	ATP5L2	Q7Z4Y8	100 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	MRPL52	Q86TS9	123 aa	Known RBP	6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	IGHV3OR16-13	A0A075B7E8	117 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	IGHV3-74	A0A0B4J1X5	117 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	IGHV1-69-2	A0A0G2JMI3	117 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772		A0A1B0GWB2	263 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	DLX6	P56179	175 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	MEF2C	Q06413	473 aa	Predicted RBP	6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	FAM27E3	Q08E93	113 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	RNF115	Q9Y4L5	304 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	LY96	Q9Y6Y9	160 aa		6.69	□□□□□ -1.34
NUMB-223	ENST00000556772	ATP5L	O75964	103 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	TSPO	P30536	169 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	FER1L6-AS1	Q8NA97	138 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	C9orf106	Q8NAJ2	232 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	PRSS2	P07478	247 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	COX6C	P09669	75 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	ZNF726P1	Q15940	193 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	MRPL16	Q9NX20	251 aa	Known RBP	6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	PLXNA4	Q9HCM2	1894 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	RIPPLY3	P57055	190 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	ORAOV1	Q8WV07	137 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	C20orf144	Q9BQM9	153 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	PCNX2	A6NKB5	2137 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	SON	P18583	2426 aa	Known RBP	6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	LGALS3	P17931	250 aa	Known RBP	6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	ID1	P41134	155 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	RAB9A	P51151	201 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	UBE2V1	Q13404	147 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	PSMG4	Q5JS54	123 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	FAM53A	Q6NSI3	398 aa	Predicted RBP	6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	OR2K2	Q8NGT1	345 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	LYPD6B	Q8NI32	183 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	ZNF257	Q9Y2Q1	563 aa		6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	6.68	□□□□□ -1.34
NUMB-223	ENST00000556772	SS18L1	O75177	396 aa	Predicted RBP	6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	IGHV3-23	P01764	117 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	CDKN1A	P38936	164 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	CACNG7	P62955	275 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	MPV17L2	Q567V2	206 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	OR4X2	Q8NGF9	303 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	RNF166	Q96A37	237 aa	Predicted RBP	6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	METRN	Q9UJH8	293 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	ZNF256	Q9Y2P7	627 aa	Predicted RBP	6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	FER1L5	A0AVI2	2057 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	hDV102S1	A0JD36	115 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	HBD	P02042	147 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	COX6B1	P14854	86 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	SAMD13	Q5VXD3	122 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	CDPF1	Q6NVV7	123 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	RASL11A	Q6T310	242 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	NHP2	Q9NX24	153 aa	Known RBP	6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	SEC11A	P67812	179 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	ZFP36L1	Q07352	338 aa	Known RBP	6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	LHFPL4	Q7Z7J7	247 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	NUP35	Q8NFH5	326 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	MS4A6A	Q9H2W1	248 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	UBTD1	Q9HAC8	227 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	HELZ	P42694	1942 aa	Known RBP	6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	EP400	Q96L91	3159 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	IL18BP	O95998	194 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	TYMS	P04818	313 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	SELL	P14151	372 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	LEP	P41159	167 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	ZNF418	Q8TF45	676 aa	Predicted RBP	6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	ZNF462	Q96JM2	2506 aa		6.67	□□□□□ -1.34
NUMB-223	ENST00000556772	IGHV3OR16-8	A0A075B7F1	116 aa		6.66	□□□□□ -1.34
NUMB-223	ENST00000556772	NPPC	P23582	126 aa		6.66	□□□□□ -1.34
NUMB-223	ENST00000556772	C10orf55	Q5SWW7	151 aa		6.66	□□□□□ -1.34
NUMB-223	ENST00000556772	MRPL27	Q9P0M9	148 aa	Known RBP	6.66	□□□□□ -1.34
NUMB-223	ENST00000556772	PSG8	Q9UQ74	426 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms