RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 DCAF8L2P0C7V8 631 aa13.72□□□□□ -0.21
NUMB-223ENST00000556772 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
NUMB-223ENST00000556772 SUPT5HO00267 1087 aaKnown RBP13.42□□□□□ -0.26
NUMB-223ENST00000556772 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
NUMB-223ENST00000556772 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
NUMB-223ENST00000556772 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.35
NUMB-223ENST00000556772 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
NUMB-223ENST00000556772 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
NUMB-223ENST00000556772 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
NUMB-223ENST00000556772 HRCP23327 699 aa12.5□□□□□ -0.41
NUMB-223ENST00000556772 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
NUMB-223ENST00000556772 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.42
NUMB-223ENST00000556772 APLP2Q06481 763 aa12.42□□□□□ -0.42
NUMB-223ENST00000556772 CCER1Q8TC90 406 aaPredicted RBP12.41□□□□□ -0.42
NUMB-223ENST00000556772 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
NUMB-223ENST00000556772 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
NUMB-223ENST00000556772 MYT1Q01538 1121 aa12.27□□□□□ -0.45
NUMB-223ENST00000556772 CHIC1Q5VXU3 224 aa12.26□□□□□ -0.45
NUMB-223ENST00000556772 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
NUMB-223ENST00000556772 LOC105371045A0A1W2PR82 267 aa12.22□□□□□ -0.45
NUMB-223ENST00000556772 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
NUMB-223ENST00000556772 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
NUMB-223ENST00000556772 ABCC9O60706 1549 aa12.14□□□□□ -0.47
NUMB-223ENST00000556772 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
NUMB-223ENST00000556772 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
NUMB-223ENST00000556772 NEFLP07196 543 aa12□□□□□ -0.49
NUMB-223ENST00000556772 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
NUMB-223ENST00000556772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
NUMB-223ENST00000556772 DIEXFQ68CQ4 756 aaKnown RBP11.92□□□□□ -0.5
NUMB-223ENST00000556772 ATP1B4Q9UN42 357 aaPredicted RBP11.9□□□□□ -0.5
NUMB-223ENST00000556772 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
NUMB-223ENST00000556772 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
NUMB-223ENST00000556772 ITGAEP38570 1179 aa11.76□□□□□ -0.53
NUMB-223ENST00000556772 ACIN1Q9UKV3 1341 aaKnown RBP11.71□□□□□ -0.53
NUMB-223ENST00000556772 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
NUMB-223ENST00000556772 DCAF1Q9Y4B6 1507 aa11.61□□□□□ -0.55
NUMB-223ENST00000556772 BCANQ96GW7 911 aa11.56□□□□□ -0.56
NUMB-223ENST00000556772 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
NUMB-223ENST00000556772 POLR3GLQ9BT43 218 aa11.53□□□□□ -0.56
NUMB-223ENST00000556772 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
NUMB-223ENST00000556772 CNGB1Q14028 1251 aaPredicted RBP11.5□□□□□ -0.57
NUMB-223ENST00000556772 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
NUMB-223ENST00000556772 MYO15BQ96JP2 1530 aa11.47□□□□□ -0.57
NUMB-223ENST00000556772 FAM50AQ14320 339 aaKnown RBP11.45□□□□□ -0.58
NUMB-223ENST00000556772 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
NUMB-223ENST00000556772 ANP32CO43423 234 aa11.41□□□□□ -0.58
NUMB-223ENST00000556772 ZCCHC6Q5VYS8 1495 aaKnown RBP11.4□□□□□ -0.58
NUMB-223ENST00000556772 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
NUMB-223ENST00000556772 CDK11AQ9UQ88 783 aaPredicted RBP11.39□□□□□ -0.59
NUMB-223ENST00000556772 FBLN2P98095 1184 aa11.38□□□□□ -0.59
NUMB-223ENST00000556772 CLSPNQ9HAW4 1339 aa11.34□□□□□ -0.59
NUMB-223ENST00000556772 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
NUMB-223ENST00000556772 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
NUMB-223ENST00000556772 FKBP8Q14318 412 aa11.3□□□□□ -0.6
NUMB-223ENST00000556772 MIER1Q8N108 512 aa11.29□□□□□ -0.6
NUMB-223ENST00000556772 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
NUMB-223ENST00000556772 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.62
NUMB-223ENST00000556772 ZNF326Q5BKZ1 582 aaKnown RBP11.18□□□□□ -0.62
NUMB-223ENST00000556772 SCRIBQ14160 1630 aa11.17□□□□□ -0.62
NUMB-223ENST00000556772 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
NUMB-223ENST00000556772 P3H3Q8IVL6 736 aa11.16□□□□□ -0.62
NUMB-223ENST00000556772 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.62
NUMB-223ENST00000556772 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
NUMB-223ENST00000556772 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
NUMB-223ENST00000556772 TONSLQ96HA7 1378 aa11.11□□□□□ -0.63
NUMB-223ENST00000556772 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
NUMB-223ENST00000556772 RSF1Q96T23 1441 aaPredicted RBP11.08□□□□□ -0.64
NUMB-223ENST00000556772 CEP162Q5TB80 1403 aa11.07□□□□□ -0.64
NUMB-223ENST00000556772 FAM9BQ8IZU0 186 aa11.06□□□□□ -0.64
NUMB-223ENST00000556772 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
NUMB-223ENST00000556772 CLIP1P30622 1438 aa11.05□□□□□ -0.64
NUMB-223ENST00000556772 IRX6P78412 446 aaPredicted RBP11.03□□□□□ -0.64
NUMB-223ENST00000556772 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
NUMB-223ENST00000556772 NBR1Q14596 966 aa11.03□□□□□ -0.64
NUMB-223ENST00000556772 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.64
NUMB-223ENST00000556772 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
NUMB-223ENST00000556772 CCDC136Q96JN2 1154 aa11□□□□□ -0.65
NUMB-223ENST00000556772 SUPT16HQ9Y5B9 1047 aaKnown RBP10.99□□□□□ -0.65
NUMB-223ENST00000556772 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
NUMB-223ENST00000556772 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
NUMB-223ENST00000556772 CANXP27824 592 aaKnown RBP10.97□□□□□ -0.65
NUMB-223ENST00000556772 TNIKQ9UKE5 1360 aa10.97□□□□□ -0.65
NUMB-223ENST00000556772 GOLGA3Q08378 1498 aa10.97□□□□□ -0.65
NUMB-223ENST00000556772 EEA1Q15075 1411 aa10.97□□□□□ -0.65
NUMB-223ENST00000556772 MRS2Q9HD23 443 aa10.97□□□□□ -0.65
NUMB-223ENST00000556772 ERCC6Q03468 1493 aa10.96□□□□□ -0.65
NUMB-223ENST00000556772 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
NUMB-223ENST00000556772 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
NUMB-223ENST00000556772 TMC1Q8TDI8 760 aa10.92□□□□□ -0.66
NUMB-223ENST00000556772 CHIC2Q9UKJ5 165 aa10.92□□□□□ -0.66
NUMB-223ENST00000556772 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
NUMB-223ENST00000556772 NACADO15069 1562 aa10.9□□□□□ -0.66
NUMB-223ENST00000556772 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
NUMB-223ENST00000556772 EIF4G2P78344 907 aaKnown RBP eCLIP10.88□□□□□ -0.67
NUMB-223ENST00000556772 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
NUMB-223ENST00000556772 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
NUMB-223ENST00000556772 WRNQ14191 1432 aaPredicted RBP eCLIP10.85□□□□□ -0.67
NUMB-223ENST00000556772 MTUS2Q5JR59 1369 aa10.84□□□□□ -0.67
NUMB-223ENST00000556772 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
NUMB-223ENST00000556772 SIN3AQ96ST3 1273 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms