RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 C19orf24Q9BVV8 132 aa15.23■□□□□ 0.03
SKP2-208ENST00000546211 C21orf62Q9NYP8 219 aa15.23■□□□□ 0.03
SKP2-208ENST00000546211 ZANQ9Y493 2812 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 TRAV30A0A087WSZ9 112 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 TRBV9A0A0B4J1U6 114 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 FABP1P07148 127 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 FGF8P55075 233 aaPredicted RBP15.22■□□□□ 0.03
SKP2-208ENST00000546211 CCL20P78556 96 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 RHOGP84095 191 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 SCGB2A2Q13296 93 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 TMEM86BQ8N661 226 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 NECAP1Q8NC96 275 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 VN1R17PQ8TDU5 208 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 FAM210AQ96ND0 272 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 TMEM160Q9NX00 188 aa15.22■□□□□ 0.03
SKP2-208ENST00000546211 HMGB3O15347 200 aaKnown RBP15.21■□□□□ 0.03
SKP2-208ENST00000546211 GNG7O60262 68 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 SCGB2A1O75556 95 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 Q56UQ5 140 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 Q6ZS46 218 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 OR1L4Q8NGR5 311 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 NPFFR1Q9GZQ6 430 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 GSX1Q9H4S2 264 aaPredicted RBP15.21■□□□□ 0.03
SKP2-208ENST00000546211 ZNF580Q9UK33 172 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 S4R3C0 116 aa15.21■□□□□ 0.03
SKP2-208ENST00000546211 EIF3GO75821 320 aaKnown RBP eCLIP15.2■□□□□ 0.02
SKP2-208ENST00000546211 DEFA5Q01523 94 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 GUK1Q16774 197 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 C15orf32Q32M92 178 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 GATAD1Q8WUU5 269 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 NOL4LQ96MY1 436 aaPredicted RBP15.2■□□□□ 0.02
SKP2-208ENST00000546211 MS4A10Q96PG2 267 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 PFDN5Q99471 154 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 RNF2Q99496 336 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 TXN2Q99757 166 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 PRSS22Q9GZN4 317 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 EIF5A2Q9GZV4 153 aaKnown RBP15.2■□□□□ 0.02
SKP2-208ENST00000546211 TREM1Q9NP99 234 aa15.2■□□□□ 0.02
SKP2-208ENST00000546211 H3BUA1 57 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 COX7A2P2O60397 106 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 TIGITQ495A1 244 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 TOR2AQ5JU69 321 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 FAM78BQ5VT40 261 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 FUT9Q9Y231 359 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 FLNAP21333 2647 aaKnown RBP15.19■□□□□ 0.02
SKP2-208ENST00000546211 ZNF469Q96JG9 3925 aaPredicted RBP15.19■□□□□ 0.02
SKP2-208ENST00000546211 AKAP9Q99996 3911 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 FAM223BA6NKX1 122 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 PPIFP30405 207 aaKnown RBP15.19■□□□□ 0.02
SKP2-208ENST00000546211 PEA15Q15121 130 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 FAM223AQ8IWN6 122 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 NARS2Q96I59 477 aaKnown RBP15.19■□□□□ 0.02
SKP2-208ENST00000546211 TMEM231Q9H6L2 316 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 SEPSECSQ9HD40 501 aaKnown RBP15.19■□□□□ 0.02
SKP2-208ENST00000546211 DNAJC4Q9NNZ3 241 aa15.19■□□□□ 0.02
SKP2-208ENST00000546211 TEX15Q9BXT5 2789 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 ANKRD34BA5PLL1 514 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 BRI3O95415 125 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 IFNA1P01562 189 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 IGKV1-17P01599 117 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 IGHV3-23P01764 117 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 OR5G3P0C626 314 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 FCGR2BP31994 310 aaPredicted RBP15.18■□□□□ 0.02
SKP2-208ENST00000546211 SRSF3P84103 164 aaKnown RBP15.18■□□□□ 0.02
SKP2-208ENST00000546211 C10orf113Q5VZT2 155 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 IQCF2Q8IXL9 164 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 EEF1AKMT3Q96AZ1 226 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 MRPL32Q9BYC8 188 aaKnown RBP15.18■□□□□ 0.02
SKP2-208ENST00000546211 DOK5Q9P104 306 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 GNG13Q9P2W3 67 aa15.18■□□□□ 0.02
SKP2-208ENST00000546211 ELOA3CA0A087WX78 387 aaPredicted RBP15.17■□□□□ 0.02
SKP2-208ENST00000546211 RBFOX3A6NFN3 312 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 CXorf1O96002 111 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 TRGV3P03979 118 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 STAG3L2P0CL84 134 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 STAG3L3P0CL85 134 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 RD3LP0DJH9 198 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 PSG1P11464 419 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 ATP5G2Q06055 141 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 SPATA31B1PQ5VZV4 182 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 ZNF502Q8TBZ5 544 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 TMEM37Q8WXS4 190 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 DUX5Q96PT3 197 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 SMR3AQ99954 134 aa15.17■□□□□ 0.02
SKP2-208ENST00000546211 GAR1Q9NY12 217 aaKnown RBP15.17■□□□□ 0.02
SKP2-208ENST00000546211 PSMB11A5LHX3 300 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 KRBOX1C9JBD0 128 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 F8W735 103 aaPredicted RBP15.16■□□□□ 0.02
SKP2-208ENST00000546211 LY6G6DO95868 133 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 TOMM40O96008 361 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 CD5P06127 495 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 ORM2P19652 201 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 YPEL3P61236 119 aaPredicted RBP15.16■□□□□ 0.02
SKP2-208ENST00000546211 HAGHQ16775 308 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 MIR17HGQ75NE6 70 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 OR1B1Q8NGR6 318 aa15.16■□□□□ 0.02
SKP2-208ENST00000546211 TRBV7-1A0A0A6YYK4 115 aa15.15■□□□□ 0.02
SKP2-208ENST00000546211 OR2T8A6NH00 312 aa15.15■□□□□ 0.02
SKP2-208ENST00000546211 TPPP2P59282 170 aa15.15■□□□□ 0.02
SKP2-208ENST00000546211 TAS2R45P59539 299 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms