RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TSPO2Q5TGU0 170 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 Q6AWC8 147 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 AMTNQ6UX39 209 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 Q6ZUT4 128 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 ZNF695Q8IW36 515 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 PIANPQ8IYJ0 282 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 SAXO1Q8IYX7 474 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 ZNF433Q8N7K0 673 aaPredicted RBP2.34□□□□□ -2.03
USP28-210ENST00000542033 SIGLECL1Q8N7X8 197 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 TMEM229BQ8NBD8 167 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 OR11H6Q8NGC7 330 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 OR10J6PQ8NGY7 276 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 OR10D3Q8NH80 312 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 OR1L1Q8NH94 360 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 CMTM2Q8TAZ6 248 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 ZNF502Q8TBZ5 544 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 CHCHD10Q8WYQ3 142 aaPredicted RBP2.34□□□□□ -2.03
USP28-210ENST00000542033 MAL2Q969L2 176 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 PLEKHB2Q96CS7 222 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 GNPNAT1Q96EK6 184 aaPredicted RBP2.34□□□□□ -2.03
USP28-210ENST00000542033 S100A16Q96FQ6 103 aaKnown RBP2.34□□□□□ -2.03
USP28-210ENST00000542033 NMES1Q9C002 83 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 EIF5A2Q9GZV4 153 aaKnown RBP2.34□□□□□ -2.03
USP28-210ENST00000542033 Q9H3A6 140 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 SLC25A37Q9NYZ2 338 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 MTFP1Q9UDX5 166 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 TRMT112Q9UI30 125 aaKnown RBP2.34□□□□□ -2.03
USP28-210ENST00000542033 CELA1Q9UNI1 258 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 DNAJC15Q9Y5T4 150 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 HEBP2Q9Y5Z4 205 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 LINC00312Q9Y6C7 94 aa2.34□□□□□ -2.03
USP28-210ENST00000542033 NHSL1Q5SYE7 1610 aa2.34□□□□□ -2.04
USP28-210ENST00000542033 ANKRD12Q6UB98 2062 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 PATJQ8NI35 1801 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ZNF318Q5VUA4 2279 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TRIP11Q15643 1979 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 IGKV1D-8A0A087WSZ0 117 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TRGV10A0A0A0MS01 117 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TRAV5A0A0B4J249 113 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TRAV8-6A0A0B4J262 113 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 A0A0G2JRQ6 117 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 DAPL1A0PJW8 107 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ZNF850A8MQ14 1090 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 K7N7A8 449 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 NPFFO15130 113 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ANGPTL7O43827 346 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ARL6IP5O75915 188 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 SERF1AO75920 110 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TTRP02766 147 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ATP5G1P05496 136 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 PFN1P07737 140 aaKnown RBP2.33□□□□□ -2.04
USP28-210ENST00000542033 FABP2P12104 132 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 AQP1P29972 269 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 S100A3P33764 101 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 OPRM1P35372 400 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ASIPP42127 132 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ATP5G3P48201 142 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 SSR4P51571 173 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 MTPNP58546 118 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 PFN3P60673 137 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 UBE2MP61081 183 aaKnown RBP2.33□□□□□ -2.04
USP28-210ENST00000542033 RPS15AP62244 130 aaKnown RBP2.33□□□□□ -2.04
USP28-210ENST00000542033 GNG5P63218 68 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TGFBR3Q03167 851 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ATP5G2Q06055 141 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 CATR1Q13166 79 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 HES1Q14469 280 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 KIAA0040Q15053 153 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TTC32Q5I0X7 151 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 MEIG1Q5JSS6 88 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ZNF684Q5T5D7 378 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 C1orf195Q5TG92 126 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ZNF880Q6PDB4 577 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 MORN3Q6PF18 240 aaPredicted RBP2.33□□□□□ -2.04
USP28-210ENST00000542033 RASL11AQ6T310 242 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ZNF322Q6U7Q0 402 aaPredicted RBP2.33□□□□□ -2.04
USP28-210ENST00000542033 DPPA3Q6W0C5 159 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 GOLT1AQ6ZVE7 132 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TMEM179BQ7Z7N9 219 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 OOSP2Q86WS3 158 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TMEM86AQ8N2M4 240 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 TMEM86BQ8N661 226 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 OR10G2Q8NGC3 310 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 OR51G1Q8NGK1 321 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 OR10AG1Q8NH19 301 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 OR4A5Q8NH83 315 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 JOSD2Q8TAC2 188 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 FNDC9Q8TBE3 224 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 C18orf32Q8TCD1 76 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 AQP3Q92482 292 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 ARPC1AQ92747 370 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 FGF14Q92915 247 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 SLC25A38Q96DW6 304 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 RBMXL1Q96E39 390 aaKnown RBP2.33□□□□□ -2.04
USP28-210ENST00000542033 SMIM14Q96QK8 99 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 SLC25A39Q9BZJ4 359 aaPredicted RBP2.33□□□□□ -2.04
USP28-210ENST00000542033 TMEM191AQ9H0A3 160 aa2.33□□□□□ -2.04
USP28-210ENST00000542033 MS4A6AQ9H2W1 248 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms