RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PIRTP0C851 137 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 IGHV3-30-3P0DP02 117 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 ZNF7P17097 686 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 KDELR1P24390 212 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 ATP6V0CP27449 155 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 CA5AP35218 305 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 RPL26P61254 145 aaKnown RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 JOSD1Q15040 202 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 RSU1Q15404 277 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 DEFB109BQ30KR1 87 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 MRPL51Q4U2R6 128 aaKnown RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 NOXRED1Q6NXP6 359 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 ZNF664Q8N3J9 261 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 TBC1D19Q8N5T2 526 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 IMP4Q96G21 291 aaKnown RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 TM2D3Q9BRN9 247 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 HIGD2AQ9BW72 106 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 FAM107BQ9H098 131 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 C19orf12Q9NSK7 152 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 RPL26L1Q9UNX3 145 aaKnown RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 TEP1Q99973 2627 aaKnown RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 ABCA12Q86UK0 2595 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 CACNA1CQ13936 2221 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 CPAMD8Q8IZJ3 1885 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 MYO9AB2RTY4 2548 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 FBN2P35556 2912 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 OTOGQ6ZRI0 2925 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 PKDREJQ9NTG1 2253 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 A0A1W2PNN7 141 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 REG1AP05451 166 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 FREM3P0C091 2139 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 CTBP2P56545 445 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 ARF6P62330 175 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 AKIRIN2Q53H80 203 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR10K2Q6IF99 312 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 SDIM1Q6ZPB5 146 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 CCDC121Q6ZUS5 278 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 UBL4BQ8N7F7 174 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 MS4A6EQ96DS6 147 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 TVP23CQ96ET8 276 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 SLC35G5Q96KT7 338 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR8B2Q96RD0 313 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 TMEM109Q9BVC6 243 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 VPREB3Q9UKI3 123 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 HHLA2Q9UM44 414 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 HEY1Q9Y5J3 304 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 CSMD2Q7Z408 3487 aa2.76□□□□□ -1.97
HMGB1P3-201ENST00000502802 POLQO75417 2590 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 DNAJC13O75165 2243 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 MED13LQ71F56 2210 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 LOC285095A0A1B0GVY8 99 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 PGRMC1O00264 195 aaKnown RBP2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 MT-CO2P00403 227 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 ZNF22P17026 224 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 CCR7P32248 378 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 CDKN2CP42773 168 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 CAPZBP47756 277 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 SERPINB9P50453 376 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 CDK9P50750 372 aaKnown RBP2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 TCL1AP56279 114 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 TMEM33P57088 247 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 DYNLT1P63172 113 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 BTN3A2P78410 334 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 C3orf33Q6P1S2 294 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 CALHM3Q86XJ0 350 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 TRAPPC5Q8IUR0 188 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 GID4Q8IVV7 300 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 BAP18Q8IXM2 172 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 C1orf174Q8IYL3 243 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR10P1Q8NGE3 313 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR8K1Q8NGG5 319 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 MUC7Q8TAX7 377 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 C16orf78Q8WTQ4 265 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 CT55Q8WUE5 264 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 NAT14Q8WUY8 206 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 RMND5BQ96G75 393 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR52B2Q96RD2 323 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 STACQ99469 402 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 UPK3BQ9BT76 320 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 ULBP3Q9BZM4 244 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR51I2Q9H344 312 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 ARMC1Q9NVT9 282 aa2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 NCOA6Q14686 2063 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P3-201ENST00000502802 NIPBLQ6KC79 2804 aaeCLIP2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 CSMD1Q96PZ7 3565 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 hCG_1818297A0A087WSY0 165 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 TLCD2A6NGC4 264 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 EVPLLA8MZ36 301 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 MIF4GDA9UHW6 222 aaKnown RBP2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 H0YJX3 145 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 CST8O60676 142 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR4E1P0C645 316 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 HIST1H1EP10412 219 aaKnown RBP2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 MARCKSL1P49006 195 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 TAS2R45P59539 299 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 NAA20P61599 178 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 REEP5Q00765 189 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 SPIN3Q5JUX0 258 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms