RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 LYSMD2Q8IV50 215 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 CROCCP3Q8IVE0 287 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 NIPSNAP3BQ9BS92 247 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 ENY2Q9NPA8 101 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 A0A0B4J293 547 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 RPS10-NUDT3A0A1W2PQS6 291 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 ATG12O94817 140 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 P0C879 139 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 PRSS3P35030 304 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 AKR1C2P52895 323 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 OR1S2Q8NGQ3 325 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 RAB26Q9ULW5 256 aa12.56□□□□□ -0.4
NUP50-218ENST00000493456 IGKV1-5P01602 117 aa12.55□□□□□ -0.4
NUP50-218ENST00000493456 NKX2-1P43699 371 aaPredicted RBP12.55□□□□□ -0.4
NUP50-218ENST00000493456 BSXQ3C1V8 233 aa12.55□□□□□ -0.4
NUP50-218ENST00000493456 FAM222AQ5U5X8 452 aa12.55□□□□□ -0.4
NUP50-218ENST00000493456 Q8WTZ3 238 aa12.55□□□□□ -0.4
NUP50-218ENST00000493456 GSTZ1O43708 216 aaPredicted RBP12.54□□□□□ -0.4
NUP50-218ENST00000493456 YPEL3P61236 119 aaPredicted RBP12.54□□□□□ -0.4
NUP50-218ENST00000493456 RND3P61587 244 aa12.54□□□□□ -0.4
NUP50-218ENST00000493456 MLANAQ16655 118 aa12.54□□□□□ -0.4
NUP50-218ENST00000493456 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
NUP50-218ENST00000493456 TMED3Q9Y3Q3 217 aa12.54□□□□□ -0.4
NUP50-218ENST00000493456 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 IGHV3OR16-12A0A075B7B8 117 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 IGLC1P0CG04 106 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 HTN3P15516 51 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 ETV6P41212 452 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 TNP2Q05952 138 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 SAMD12Q8N8I0 201 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
NUP50-218ENST00000493456 ZNF486Q96H40 463 aaPredicted RBP12.53□□□□□ -0.4
NUP50-218ENST00000493456 ANKRD65E5RJM6 399 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 IL4P05112 153 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 SLC25A4P12235 298 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 OR10J1P30954 320 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 HTR2BP41595 481 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 TMEM88Q6PEY1 159 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 Q8N1X5 172 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 GPX8Q8TED1 209 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 CLUHP3Q96NS8 147 aa12.52□□□□□ -0.41
NUP50-218ENST00000493456 BUB3O43684 328 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 RCVRNP35243 200 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 RND2P52198 227 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 DHODHQ02127 395 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 USF2Q15853 346 aaPredicted RBP12.51□□□□□ -0.41
NUP50-218ENST00000493456 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 SCPEP1Q9HB40 452 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
NUP50-218ENST00000493456 HBE1P02100 147 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 PGAM2P15259 253 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 NUP62P37198 522 aaPredicted RBP12.5□□□□□ -0.41
NUP50-218ENST00000493456 PIGPP57054 158 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 C6orf223Q8N319 242 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
NUP50-218ENST00000493456 RRNAD1Q96FB5 475 aaKnown RBP12.5□□□□□ -0.41
NUP50-218ENST00000493456 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
NUP50-218ENST00000493456 YTHDF1Q9BYJ9 559 aaKnown RBP12.5□□□□□ -0.41
NUP50-218ENST00000493456 SAV1Q9H4B6 383 aaPredicted RBP12.5□□□□□ -0.41
NUP50-218ENST00000493456 LOC102723971A0A1B0GUV8 181 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 ALDH3B2P48448 385 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 FXYD7P58549 80 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 SPCS3P61009 180 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 DAD1P61803 113 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 TRIM16LQ309B1 348 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 SPATA31B1PQ5VZV4 182 aa12.49□□□□□ -0.41
NUP50-218ENST00000493456 YTHDF2Q9Y5A9 579 aaKnown RBP12.49□□□□□ -0.41
NUP50-218ENST00000493456 NBDYA0A0U1RRE5 68 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 C3orf85A0A1B0GTC6 90 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 TOMM40O96008 361 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 ID1P41134 155 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 AARDQ4LEZ3 155 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 ETFRF1Q6IPR1 90 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 GSG1LQ6UXU4 331 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 OR52E5Q8NH55 327 aa12.48□□□□□ -0.41
NUP50-218ENST00000493456 RNASE11Q8TAA1 199 aaKnown RBP12.48□□□□□ -0.41
NUP50-218ENST00000493456 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
NUP50-218ENST00000493456 PI3P19957 117 aa12.47□□□□□ -0.41
NUP50-218ENST00000493456 PSMB3P49720 205 aa12.47□□□□□ -0.41
NUP50-218ENST00000493456 RRN3P1Q2M238 152 aa12.47□□□□□ -0.41
NUP50-218ENST00000493456 FAM219AQ8IW50 185 aa12.47□□□□□ -0.41
NUP50-218ENST00000493456 LINC00052Q96N35 136 aa12.47□□□□□ -0.41
NUP50-218ENST00000493456 C7orf50Q9BRJ6 194 aaKnown RBP12.47□□□□□ -0.41
NUP50-218ENST00000493456 PFDN2Q9UHV9 154 aa12.47□□□□□ -0.41
NUP50-218ENST00000493456 A0A0G2JRQ6 117 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 SMIM31A0A1B0GVY4 71 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 B3GALNT1O75752 331 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 UCP1P25874 307 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 PSG9Q00887 426 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 ZNF79Q15937 498 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 LHFPL1Q86WI0 220 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 SLC24A4Q8NFF2 622 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 OR4B1Q8NGF8 309 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 COQ8AQ8NI60 647 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms