RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 ZNF705DP0CH99 300 aaPredicted RBP9.74□□□□□ -0.85
SAMM50-204ENST00000493161 ZNF705BP0CI00 300 aaPredicted RBP9.74□□□□□ -0.85
SAMM50-204ENST00000493161 SPART-AS1P0CW21 52 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 PGAM2P15259 253 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 RND2P52198 227 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 PIGPP57054 158 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 RND3P61587 244 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 NUTF2P61970 127 aaKnown RBP9.74□□□□□ -0.85
SAMM50-204ENST00000493161 DHODHQ02127 395 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 KCTD21Q4G0X4 260 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 PRSS54Q6PEW0 395 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 CROCCP3Q8IVE0 287 aa9.74□□□□□ -0.85
SAMM50-204ENST00000493161 C3orf85A0A1B0GTC6 90 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 NXPH3O95157 252 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 HLA-DRB4P13762 266 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 OR10J1P30954 320 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 RCVRNP35243 200 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 EIF2B2P49770 351 aaKnown RBP9.73□□□□□ -0.85
SAMM50-204ENST00000493161 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
SAMM50-204ENST00000493161 RNASE12Q5GAN4 147 aaKnown RBP9.73□□□□□ -0.85
SAMM50-204ENST00000493161 TMEM170AQ8WVE7 144 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 NEU1Q99519 415 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 PDCD10Q9BUL8 212 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 ENY2Q9NPA8 101 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 DKK2Q9UBU2 259 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 HLA-DRB4X5D2U9 266 aa9.73□□□□□ -0.85
SAMM50-204ENST00000493161 TRAV30A0A087WSZ9 112 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 IL4P05112 153 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 HTN3P15516 51 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 AP2S1P53680 142 aaPredicted RBP9.72□□□□□ -0.85
SAMM50-204ENST00000493161 YPEL3P61236 119 aaPredicted RBP9.72□□□□□ -0.85
SAMM50-204ENST00000493161 FAM222AQ5U5X8 452 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 LHFPL1Q86WI0 220 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 OR1S2Q8NGQ3 325 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 Q8WTZ3 238 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 SCPEP1Q9HB40 452 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 COMMD3Q9UBI1 195 aa9.72□□□□□ -0.85
SAMM50-204ENST00000493161 BUB3O43684 328 aa9.71□□□□□ -0.86
SAMM50-204ENST00000493161 TNP2Q05952 138 aa9.71□□□□□ -0.86
SAMM50-204ENST00000493161 TRIM16LQ309B1 348 aa9.71□□□□□ -0.86
SAMM50-204ENST00000493161 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
SAMM50-204ENST00000493161 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.86
SAMM50-204ENST00000493161 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.86
SAMM50-204ENST00000493161 NACAE9PAV3 2078 aa9.71□□□□□ -0.86
SAMM50-204ENST00000493161 LRP1BQ9NZR2 4599 aa9.71□□□□□ -0.86
SAMM50-204ENST00000493161 SMIM9A6NGZ8 99 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 SCGB2A1O75556 95 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 ELK1P19419 428 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
SAMM50-204ENST00000493161 SPCS3P61009 180 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 RNF212Q495C1 297 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 TMEM88Q6PEY1 159 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 ZNF709Q8N972 641 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 OR4D10Q8NGI6 311 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 LHFPL5Q8TAF8 219 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 NPIPB3Q92617 1050 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 YIPF6Q96EC8 236 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 ZNF486Q96H40 463 aaPredicted RBP9.7□□□□□ -0.86
SAMM50-204ENST00000493161 FAM210BQ96KR6 192 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 NIPSNAP3BQ9BS92 247 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 SLC35B3Q9H1N7 401 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 SEPSECSQ9HD40 501 aaKnown RBP9.7□□□□□ -0.86
SAMM50-204ENST00000493161 KLK11Q9UBX7 282 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 RFNGQ9Y644 331 aa9.7□□□□□ -0.86
SAMM50-204ENST00000493161 SMIM31A0A1B0GVY4 71 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 RPS10-NUDT3A0A1W2PQS6 291 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 TMEM189A5PLL7 270 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 HPGDSO60760 199 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 APOA1P02647 267 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 CD3DP04234 171 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 RD3LP0DJH9 198 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 UCP1P25874 307 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 HTR2BP41595 481 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 C2orf83Q53S99 150 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 C1orf158Q8N1D5 194 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 OR51G1Q8NGK1 321 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 RNASE11Q8TAA1 199 aaKnown RBP9.69□□□□□ -0.86
SAMM50-204ENST00000493161 RRNAD1Q96FB5 475 aaKnown RBP9.69□□□□□ -0.86
SAMM50-204ENST00000493161 LINC00052Q96N35 136 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 Q9H521 79 aa9.69□□□□□ -0.86
SAMM50-204ENST00000493161 HEYLQ9NQ87 328 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-204ENST00000493161 C16orf90A8MZG2 172 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 F6UB75 175 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 ATG12O94817 140 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 ATP6V1G2O95670 118 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 TOMM40O96008 361 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 PSG1P11464 419 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 SLC25A4P12235 298 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 MEF2DQ14814 521 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 RNASE10Q5GAN6 216 aaKnown RBP9.68□□□□□ -0.86
SAMM50-204ENST00000493161 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 OR4B1Q8NGF8 309 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 OR13C8Q8NGS7 320 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 RNASEH2CQ8TDP1 164 aaKnown RBP9.68□□□□□ -0.86
SAMM50-204ENST00000493161 ACY3Q96HD9 319 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 SAV1Q9H4B6 383 aaPredicted RBP9.68□□□□□ -0.86
SAMM50-204ENST00000493161 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms