RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 RRN3P1Q2M238 152 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 FAM229BQ4G0N7 80 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 FKBP1CQ5VVH2 108 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 RASL11AQ6T310 242 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 LCA10Q71F78 164 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 SSX8Q7RTT4 187 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 DAND5Q8N907 189 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 OR4K15Q8NH41 348 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 FNDC9Q8TBE3 224 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H2BHQ93079 126 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 RNASE6Q93091 150 aaKnown RBP1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H2BNQ99877 126 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H2BMQ99879 126 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 POPDC3Q9HBV1 291 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 PCTPQ9UKL6 214 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 SNX12Q9UMY4 172 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 WIZO95785 1651 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 IGKV1D-43A0A0B4J1Z2 117 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 TRDV1A0A1B0GX56 115 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 GRIFINA4D1Z8 144 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 TLCD2A6NGC4 264 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 C19orf84I3L1E1 186 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 J3QKU1 62 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 OVOL1O14753 267 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 LY6HO94772 140 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 TNFSF15O95150 251 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 SOD1P00441 154 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 C1QAP02745 245 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 P0DMU3 169 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 FAM231AP0DMU4 169 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 FAM231CP0DMU5 169 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 EVI2AP22794 236 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 CD200P41217 278 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 RPL27AP46776 148 aaKnown RBP1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 CSN1S1P47710 185 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 EVX1P49640 407 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 ZNF80P51504 273 aaPredicted RBP1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 TAS2R20P59543 309 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 RPL30P62888 115 aaKnown RBP1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 PLCXD2Q0VAA5 305 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 RTL8BQ17RB0 113 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 AADACL3Q5VUY0 350 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 CROCCP2Q86T23 111 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 PRR15Q8IV56 129 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 C10orf126Q8N4M7 172 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 RPS4Y2Q8TD47 263 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 SLAMF6Q96DU3 332 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 TEX37Q96LM6 180 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 GPX7Q96SL4 187 aaPredicted RBP1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 DERL1Q9BUN8 251 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 OR2H1Q9GZK4 316 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 C11orf1Q9H5F2 150 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 IL36BQ9NZH7 164 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 CALML5Q9NZT1 146 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 CKLFQ9UBR5 152 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 TP73-AS1Q9UF72 201 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 FUT9Q9Y231 359 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 U3KQ87 197 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 CD109Q6YHK3 1445 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 SRCAPQ6ZRS2 3230 aa1.89□□□□□ -2.11
SMNDC1-205ENST00000477763 SHANK3Q9BYB0 1731 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 CCDC88BA6NC98 1476 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TARBP1Q13395 1621 aaKnown RBP1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 IGHV3-73A0A0B4J1V6 119 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TRAV5A0A0B4J249 113 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 ARRDC5A6NEK1 342 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 C9JAW5 83 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 H7BYZ3 331 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TRGC2P03986 189 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 CMPK1P30085 196 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 S100A11P31949 105 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H4AP62805 103 aaKnown RBP1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 EIF3IQ13347 325 aaKnown RBP1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 IDO2Q6ZQW0 420 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 SPATA12Q7Z6I5 190 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 LHFPL1Q86WI0 220 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TCTE3Q8IZS6 198 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 OR8I2Q8N0Y5 310 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TMEM203Q969S6 136 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 CARD19Q96LW7 228 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 SLC25A21Q9BQT8 299 aaPredicted RBP1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 YIPF3Q9GZM5 350 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TMEM133Q9H2Q1 129 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TRAPPC2LQ9UL33 140 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 HIGD1AQ9Y241 93 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 MINOS1-NBL1R4GNA1 71 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 CHD2O14647 1828 aaKnown RBP1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TECPR2O15040 1411 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 EIF4G3O43432 1585 aaKnown RBP1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 TRPM3Q9HCF6 1732 aaPredicted RBP1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 PTPRMP28827 1452 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 KDM6BO15054 1643 aa1.88□□□□□ -2.11
SMNDC1-205ENST00000477763 OVOS2A0A0G2JMS6 1433 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 CCDC160A6NGH7 325 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 FNDC10F2Z333 226 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 BUB1B-PAK6H3BSN5 160 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 TAX1BP3O14907 124 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 GGCTO75223 188 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms