RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 IGKV3-20P01619 116 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 HBE1P02100 147 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 NAT1P18440 290 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 SDC2P34741 201 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 MLANAQ16655 118 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 SIGLEC15Q6ZMC9 328 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 BLOC1S6Q9UL45 172 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 GOLT1BQ9Y3E0 138 aa14.23□□□□□ -0.13
PDLIM1-202ENST00000477757 EBAG9O00559 213 aa14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 IGLC1P0CG04 106 aa14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 MXD1Q05195 221 aa14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 USF2Q15853 346 aaPredicted RBP14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 IDNKQ5T6J7 187 aa14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 GSG1LQ6UXU4 331 aa14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 OR1S2Q8NGQ3 325 aa14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 SAV1Q9H4B6 383 aaPredicted RBP14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 FAT1Q14517 4588 aa14.22□□□□□ -0.13
PDLIM1-202ENST00000477757 A0A0B4J293 547 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 IGKV1-5P01602 117 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 CLEC2LP0C7M8 214 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 P0C879 139 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 DEFB1P60022 68 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 KRTAP10-2P60368 255 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 BSXQ3C1V8 233 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 LPCAT3Q6P1A2 487 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 FOXI2Q6ZQN5 318 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 SSR3Q9UNL2 185 aa14.21□□□□□ -0.13
PDLIM1-202ENST00000477757 BUB3O43684 328 aa14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 GSTZ1O43708 216 aaPredicted RBP14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 INAFM2P0DMQ5 153 aa14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 HRH1P35367 487 aa14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 YPEL3P61236 119 aaPredicted RBP14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 RRN3P1Q2M238 152 aa14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 C1orf158Q8N1D5 194 aa14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 Q8WTZ3 238 aa14.2□□□□□ -0.14
PDLIM1-202ENST00000477757 IL4P05112 153 aa14.19□□□□□ -0.14
PDLIM1-202ENST00000477757 DHODHQ02127 395 aa14.19□□□□□ -0.14
PDLIM1-202ENST00000477757 C7orf50Q9BRJ6 194 aaKnown RBP14.19□□□□□ -0.14
PDLIM1-202ENST00000477757 PDCD10Q9BUL8 212 aa14.19□□□□□ -0.14
PDLIM1-202ENST00000477757 SLC35B3Q9H1N7 401 aa14.19□□□□□ -0.14
PDLIM1-202ENST00000477757 VPS13BQ7Z7G8 4022 aa14.19□□□□□ -0.14
PDLIM1-202ENST00000477757 RPS10-NUDT3A0A1W2PQS6 291 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 PSMB9P28065 219 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 OR10J1P30954 320 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 ETV6P41212 452 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 RND2P52198 227 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 CCL18P55774 89 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 TAS2R20P59543 309 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 ZNF79Q15937 498 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 PRSS54Q6PEW0 395 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 SCPEP1Q9HB40 452 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 ENY2Q9NPA8 101 aa14.18□□□□□ -0.14
PDLIM1-202ENST00000477757 AKR1C2P52895 323 aa14.17□□□□□ -0.14
PDLIM1-202ENST00000477757 LYSMD2Q8IV50 215 aa14.17□□□□□ -0.14
PDLIM1-202ENST00000477757 OR4B1Q8NGF8 309 aa14.17□□□□□ -0.14
PDLIM1-202ENST00000477757 NRG4Q8WWG1 115 aa14.17□□□□□ -0.14
PDLIM1-202ENST00000477757 LINC00588Q9Y4M8 146 aa14.17□□□□□ -0.14
PDLIM1-202ENST00000477757 NUDT3O95989 172 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 BTF3P20290 206 aaKnown RBP14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 HSPA13P48723 471 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 PSMB3P49720 205 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 RORCP51449 518 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 UCP3P55916 312 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 PSG9Q00887 426 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 SPATA31B1PQ5VZV4 182 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 LINC00052Q96N35 136 aa14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 WDR12Q9GZL7 423 aaKnown RBP14.16□□□□□ -0.14
PDLIM1-202ENST00000477757 SLC25A4P12235 298 aa14.15□□□□□ -0.14
PDLIM1-202ENST00000477757 HLA-DMAP28067 261 aa14.15□□□□□ -0.14
PDLIM1-202ENST00000477757 PAX9P55771 341 aa14.15□□□□□ -0.14
PDLIM1-202ENST00000477757 GABARAPL2P60520 117 aa14.15□□□□□ -0.14
PDLIM1-202ENST00000477757 TSPAN5P62079 268 aa14.15□□□□□ -0.14
PDLIM1-202ENST00000477757 TTC32Q5I0X7 151 aa14.15□□□□□ -0.14
PDLIM1-202ENST00000477757 KRTAP1-5Q9BYS1 174 aa14.15□□□□□ -0.14
PDLIM1-202ENST00000477757 LYRM9A8MSI8 78 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 SOCS3O14543 225 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 TMEM127O75204 238 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 TOMM40O96008 361 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 NUP62P37198 522 aaPredicted RBP14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 ID1P41134 155 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 TMEM69Q5SWH9 247 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 COQ8AQ8NI60 647 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 S100A16Q96FQ6 103 aaKnown RBP14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 MAGT1Q9H0U3 335 aa14.14□□□□□ -0.15
PDLIM1-202ENST00000477757 ATG12O94817 140 aa14.13□□□□□ -0.15
PDLIM1-202ENST00000477757 HTR2BP41595 481 aa14.13□□□□□ -0.15
PDLIM1-202ENST00000477757 RND3P61587 244 aa14.13□□□□□ -0.15
PDLIM1-202ENST00000477757 FAM78BQ5VT40 261 aa14.13□□□□□ -0.15
PDLIM1-202ENST00000477757 FCGR1BQ92637 280 aa14.13□□□□□ -0.15
PDLIM1-202ENST00000477757 CNBD2Q96M20 576 aa14.13□□□□□ -0.15
PDLIM1-202ENST00000477757 KLK11Q9UBX7 282 aa14.13□□□□□ -0.15
PDLIM1-202ENST00000477757 F5H768 121 aa14.12□□□□□ -0.15
PDLIM1-202ENST00000477757 RD3LP0DJH9 198 aa14.12□□□□□ -0.15
PDLIM1-202ENST00000477757 UBE2NLQ5JXB2 153 aa14.12□□□□□ -0.15
PDLIM1-202ENST00000477757 RNASEH2CQ8TDP1 164 aaKnown RBP14.12□□□□□ -0.15
PDLIM1-202ENST00000477757 TP53RKQ96S44 253 aa14.12□□□□□ -0.15
PDLIM1-202ENST00000477757 TMEM208Q9BTX3 173 aa14.12□□□□□ -0.15
PDLIM1-202ENST00000477757 A0A0G2JRQ6 117 aa14.11□□□□□ -0.15
PDLIM1-202ENST00000477757 A0A0J9YX75 114 aa14.11□□□□□ -0.15
PDLIM1-202ENST00000477757 F6UB75 175 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms