RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 RGPD4Q7Z3J3 1758 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 KIDINS220Q9ULH0 1771 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 MYO18AQ92614 2054 aaKnown RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 ASXL1Q8IXJ9 1541 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 TRBV19A0A075B6N1 114 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 TRBV24-1A0A075B6N3 115 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 hCG_1818297A0A087WSY0 165 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 A0A1B0GWB2 263 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 PLAC8L1A1L4L8 177 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 A8MT66 165 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 H0Y9J4 135 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 TMEM250H0YL14 139 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 J3QT63 122 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 M0R2P5 195 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 FCN1O00602 326 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 PIRO00625 290 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ISLRO14498 428 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 CDX4O14627 284 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 GEMIN2O14893 280 aaKnown RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 SOCS1O15524 211 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 LYRM1O43325 122 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 GSTZ1O43708 216 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 LY6G6DO95868 133 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 NAPSAO96009 420 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 CYB5AP00167 134 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 HLA-DRB1P01911 266 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 TRGC2P03986 189 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 LGALS2P05162 132 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 SFTA3P0C7M3 94 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 CECR9P0C854 216 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 LINC00869P0C866 280 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 CRYGAP11844 174 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 CRYGSP22914 178 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 PSMB9P28065 219 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 PRSS3P35030 304 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 BTCP35070 178 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 HINT1P49773 126 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 ATP4BP51164 291 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 RND2P52198 227 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 POLR2JP52435 117 aaKnown RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 LIM2P55344 173 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 RPS11P62280 158 aaKnown RBP eCLIP1.83□□□□□ -2.12
XRN1-211ENST00000477237 SEC11AP67812 179 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 FOXF1Q12946 379 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ZNF345Q14585 488 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ELOBQ15370 118 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 OR7A5Q15622 319 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 RRN3P1Q2M238 152 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 SP6Q3SY56 376 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 VMA21Q3ZAQ7 101 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 FAM182AQ5T1J6 154 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 PVRIGQ6DKI7 326 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ZNF493Q6ZR52 646 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 TMEM179BQ7Z7N9 219 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 RPS19BP1Q86WX3 136 aaKnown RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 GVQW1Q8N7I0 195 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 Q8N976 141 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ZIC4Q8N9L1 334 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 OR10J6PQ8NGY7 276 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 SGMS2Q8NHU3 365 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 MAL2Q969L2 176 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 SLC25A38Q96DW6 304 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 LINC00526Q96FQ7 95 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 DPH3Q96FX2 82 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ZC2HC1AQ96GY0 325 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 SLC25A44Q96H78 314 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 SLC25A21Q9BQT8 299 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 TCEAL2Q9H3H9 227 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 DUSP21Q9H596 190 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ST20Q9HBF5 79 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 BCL2L10Q9HD36 194 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 ZNF331Q9NQX6 463 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 CCDC167Q9P0B6 97 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 OR5V1Q9UGF6 321 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 RPUSD1Q9UJJ7 312 aaKnown RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 WASHC3Q9Y3C0 194 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 AMMECR1Q9Y4X0 333 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 CHCHD2Q9Y6H1 151 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 ABCC8Q09428 1581 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 PLXNA4Q9HCM2 1894 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 PLCH1Q4KWH8 1693 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 TOPAZ1Q8N9V7 1692 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 FANCMQ8IYD8 2048 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 RGPD8O14715 1765 aaPredicted RBP1.82□□□□□ -2.12
XRN1-211ENST00000477237 SIPA1L3O60292 1781 aaPredicted RBP1.82□□□□□ -2.12
XRN1-211ENST00000477237 RGPD2P0DJD1 1756 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 RGPD5Q99666 1765 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 DOCK2Q92608 1830 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 TULP4Q9NRJ4 1543 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 PDCD11Q14690 1871 aaKnown RBP1.82□□□□□ -2.12
XRN1-211ENST00000477237 ADGRB1O14514 1584 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 TRAV19A0A0A6YYK7 116 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 TRBV7-6A0A0J9YX20 115 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 KNCNA6PVL3 124 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 ZNF705FA8MVS1 300 aaPredicted RBP1.82□□□□□ -2.12
XRN1-211ENST00000477237 F8W1H4 67 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 H3BRM9 83 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 H7C1H1 209 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 M0R1X1 148 aa1.82□□□□□ -2.12
XRN1-211ENST00000477237 UQCRQO14949 82 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms