RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 IGHV1-69P01742 117 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 FXYD7P58549 80 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 SURF2Q15527 256 aaPredicted RBP2.58□□□□□ -2
VPS13D-207ENST00000476169 LGALS9BQ3B8N2 356 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 SCGB2B2Q4G0G5 96 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 TMEM78Q5T7P6 136 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 AADACL3Q5VUY0 350 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 LGALS9CQ6DKI2 356 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 NOXRED1Q6NXP6 359 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 CROCCP2Q86T23 111 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 OSR2Q8N2R0 312 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 CNEP1R1Q8N9A8 125 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 RMND5BQ96G75 393 aaPredicted RBP2.58□□□□□ -2
VPS13D-207ENST00000476169 EFCAB11Q9BUY7 163 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 CCDC32Q9BV29 185 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 C20orf27Q9GZN8 174 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 C6orf62Q9GZU0 229 aaPredicted RBP2.58□□□□□ -2
VPS13D-207ENST00000476169 CHST6Q9GZX3 395 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 C11orf1Q9H5F2 150 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 IL36BQ9NZH7 164 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 LAMB2P55268 1798 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 ARFGEF1Q9Y6D6 1849 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 DOCK5Q9H7D0 1870 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 TRBV19A0A075B6N1 114 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 IGKV2D-24A0A075B6R9 120 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 IGKV1D-37A0A075B6S9 117 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 TRAV4A0A0B4J268 109 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 TRAV40A0A0B4J280 105 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 A0A1W2PRE2 83 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 C19orf71A6NCJ1 209 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SIGLEC16A6NMB1 481 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 C1orf196B1AJZ1 125 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 OR2J2O76002 312 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SOD1P00441 154 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 TFPTP0C1Z6 253 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 CCL3P10147 92 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SCGB1A1P11684 91 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 S100A4P26447 101 aaKnown RBP2.57□□□□□ -2
VPS13D-207ENST00000476169 CASP1P29466 404 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 BLVRBP30043 206 aaPredicted RBP2.57□□□□□ -2
VPS13D-207ENST00000476169 G6PCP35575 357 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 PIGPP57054 158 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 AP1S1P61966 158 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 CCL20P78556 96 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
VPS13D-207ENST00000476169 AKR1C1Q04828 323 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 BAMBIQ13145 260 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SDIM1Q6ZPB5 146 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SH2D6Q7Z4S9 175 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 DNAJC9Q8WXX5 260 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 H1FXQ92522 213 aaKnown RBP2.57□□□□□ -2
VPS13D-207ENST00000476169 STARD4Q96DR4 205 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 C2orf50Q96LR7 162 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SERPINI1Q99574 410 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SCRT1Q9BWW7 348 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 SMDT1Q9H4I9 107 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 ASF1BQ9NVP2 202 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 KLK5Q9Y337 293 aaPredicted RBP2.57□□□□□ -2
VPS13D-207ENST00000476169 CABIN1Q9Y6J0 2220 aa2.57□□□□□ -2
VPS13D-207ENST00000476169 ANKRD36CQ5JPF3 1778 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 NUP98P52948 1817 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 IGHV3OR16-8A0A075B7F1 116 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 C17orf51A8MQB3 221 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 K7EM74 188 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 UBFD1O14562 309 aaKnown RBP2.56□□□□□ -2
VPS13D-207ENST00000476169 LEPROTO15243 131 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 ARPC5O15511 151 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 OR10J4P0C629 311 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 HTR4Q13639 388 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 Q6P435 159 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 ZNF705AQ6ZN79 300 aaPredicted RBP2.56□□□□□ -2
VPS13D-207ENST00000476169 EXOC3-AS1Q8N2X6 119 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 RPRMLQ8N4K4 120 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 C12orf45Q8N5I9 185 aaPredicted RBP2.56□□□□□ -2
VPS13D-207ENST00000476169 ST6GALNAC3Q8NDV1 305 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 OR13C4Q8NGS5 318 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 ZNF675Q8TD23 568 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 DNAJC30Q96LL9 226 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 MIEN1Q9BRT3 115 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 IMUPQ9GZP8 106 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 PBOV1Q9GZY1 135 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 PRO3102Q9H379 93 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 SPANXA1Q9NS26 97 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 SLC39A9Q9NUM3 307 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 TP73-AS1Q9UF72 201 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 AMMECR1Q9Y4X0 333 aaPredicted RBP2.56□□□□□ -2
VPS13D-207ENST00000476169 PTPRJQ12913 1337 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 CACNA1SQ13698 1873 aa2.56□□□□□ -2
VPS13D-207ENST00000476169 IGLV4-60A0A075B6I1 120 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 IGKV1D-43A0A0B4J1Z2 117 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 TRAV41A0A0B4J266 112 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 LOC102725191A0A1B0GVB3 256 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 MDFIC2A0A1B0GVS7 189 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 DUXBA0A1W2PPF3 345 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 PRORSD1PA6NEY8 169 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 CDS2O95674 445 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 HLA-DMBP28068 263 aa2.55□□□□□ -2
VPS13D-207ENST00000476169 RBM11P57052 281 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms