RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ZNF705DP0CH99 300 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNF705BP0CI00 300 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 RFX2P48378 723 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 PPP5CP53041 499 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 EMP1P54849 157 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 HSPE1P61604 102 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 TMEM88Q6PEY1 159 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 DHRS11Q6UWP2 260 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 CMTM1Q8IZ96 169 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 TSPAN14Q8NG11 270 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 OR5H6Q8NGV6 325 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 SEC22AQ96IW7 307 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 VCXQ9H320 206 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 AUNIPQ9H7T9 357 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 EHFQ9NZC4 300 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 MRPL36Q9P0J6 103 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 A0A0A6YYH2 397 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 NBDYA0A0U1RRE5 68 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 TEX48A0A1B0GUV7 120 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 SMIM9A6NGZ8 99 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 A6NJ64 397 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 FAM90A26D6RGX4 464 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 INS-IGF2F8WCM5 200 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 GPR31O00270 319 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 IGKV1-17P01599 117 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 INAFM2P0DMQ5 153 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 HLA-DRB4P13762 266 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 HTN3P15516 51 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 CBX5P45973 191 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 EIF2B2P49770 351 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 AQP4P55087 323 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 FAM3BP58499 235 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 NUTF2P61970 127 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 SNRPD3P62318 126 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 ERHP84090 104 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 DHRS2Q13268 280 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 OXA1LQ15070 435 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 PHLDA2Q53GA4 152 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 SPINK9Q5DT21 86 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 GDF5OSQ5U4N7 250 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 FAM222AQ5U5X8 452 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 H2BFWTQ7Z2G1 175 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 C6orf223Q8N319 242 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 OR4X1Q8NH49 305 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 OR4A16Q8NH70 328 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 GLMPQ8WWB7 406 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 NRG4Q8WWG1 115 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 MRGPRFQ96AM1 343 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 NARS2Q96I59 477 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 NIPSNAP3BQ9BS92 247 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNF2Q9BSG1 426 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 YTHDF1Q9BYJ9 559 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 FNDC4Q9H6D8 234 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 RNF167Q9H6Y7 350 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 FAM212BQ9NTI7 297 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 TXNL4BQ9NX01 149 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 ANAPC10Q9UM13 185 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 RRP15Q9Y3B9 282 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 RFNGQ9Y644 331 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 HLA-DRB4X5D2U9 266 aa3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 FLG2Q5D862 2391 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-204ENST00000474025 IGHV3OR16-12A0A075B7B8 117 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 CORTO00230 105 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 CLN5O75503 358 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 PMP2P02689 132 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 P0C879 139 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 RNASE2P10153 161 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 SDC2P34741 201 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 SNCAP37840 140 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 TAS2R46P59540 309 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 IZUMO4Q1ZYL8 232 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 TIGITQ495A1 244 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 SPATA12Q7Z6I5 190 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNF709Q8N972 641 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 C15orf53Q8NAA6 179 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNRF2Q8NHG8 242 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 TMEM230Q96A57 120 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 NRN1Q9NPD7 142 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 IFT46Q9NQC8 304 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 TMED3Q9Y3Q3 217 aa3.61□□□□□ -1.83
SNRNP40-204ENST00000474025 A0A0B4J293 547 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 LOC102723971A0A1B0GUV8 181 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 EBAG9O00559 213 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 SCGB2A1O75556 95 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 IGKV1-5P01602 117 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 IGKV3-20P01619 116 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 IGLC1P0CG04 106 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 HRH1P35367 487 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 OPRK1P41145 380 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 NKX2-1P43699 371 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 RPL5P46777 297 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 AP2S1P53680 142 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 FXYD7P58549 80 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 LINC00310P59036 64 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 DEFB1P60022 68 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 KRTAP10-2P60368 255 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms