RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 Q8N1X5 172 aa8.9□□□□□ -0.98
TRAF4-209ENST00000473421 SLC35G3Q8N808 338 aa8.9□□□□□ -0.98
TRAF4-209ENST00000473421 NIPSNAP3BQ9BS92 247 aa8.9□□□□□ -0.98
TRAF4-209ENST00000473421 WDR12Q9GZL7 423 aaKnown RBP8.9□□□□□ -0.98
TRAF4-209ENST00000473421 Q9H521 79 aa8.9□□□□□ -0.98
TRAF4-209ENST00000473421 VCX3AQ9NNX9 186 aa8.9□□□□□ -0.98
TRAF4-209ENST00000473421 SMIM31A0A1B0GVY4 71 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 M0QYG6 137 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 HNRNPCP07910 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRAF4-209ENST00000473421 HLA-DRB4P13762 266 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 SP6Q3SY56 376 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 TMEM69Q5SWH9 247 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 SAMD12Q8N8I0 201 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 GPX8Q8TED1 209 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
TRAF4-209ENST00000473421 HLA-DRB4X5D2U9 266 aa8.89□□□□□ -0.99
TRAF4-209ENST00000473421 F6UB75 175 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 BUB3O43684 328 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 PRSS3P35030 304 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 RPS19P39019 145 aaKnown RBP8.88□□□□□ -0.99
TRAF4-209ENST00000473421 RPL5P46777 297 aaKnown RBP8.88□□□□□ -0.99
TRAF4-209ENST00000473421 HOXA1P49639 335 aaPredicted RBP8.88□□□□□ -0.99
TRAF4-209ENST00000473421 RND2P52198 227 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 UCP3P55916 312 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 TSPAN5P62079 268 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 SOHLH1Q5JUK2 328 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 FAM210BQ96KR6 192 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 C1QTNF4Q9BXJ3 329 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 YTHDF1Q9BYJ9 559 aaKnown RBP8.88□□□□□ -0.99
TRAF4-209ENST00000473421 NRN1Q9NPD7 142 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 SCRT2Q9NQ03 307 aa8.88□□□□□ -0.99
TRAF4-209ENST00000473421 YTHDF2Q9Y5A9 579 aaKnown RBP8.88□□□□□ -0.99
TRAF4-209ENST00000473421 FAT1Q14517 4588 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 IL4P05112 153 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 ELK1P19419 428 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 OR10J1P30954 320 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 NUTF2P61970 127 aaKnown RBP8.87□□□□□ -0.99
TRAF4-209ENST00000473421 UBE2NLQ5JXB2 153 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 ZNRF2Q8NHG8 242 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 FCGR1BQ92637 280 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 RFNGQ9Y644 331 aa8.87□□□□□ -0.99
TRAF4-209ENST00000473421 NBDYA0A0U1RRE5 68 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 SUB1P53999 127 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRAF4-209ENST00000473421 PIGPP57054 158 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 YPEL3P61236 119 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-209ENST00000473421 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
TRAF4-209ENST00000473421 NEDD8Q15843 81 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 KCTD21Q4G0X4 260 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 LPCAT3Q6P1A2 487 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 SIGLEC15Q6ZMC9 328 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 Q8WTZ3 238 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 NARS2Q96I59 477 aaKnown RBP8.86□□□□□ -0.99
TRAF4-209ENST00000473421 LINC00052Q96N35 136 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 RAB26Q9ULW5 256 aa8.86□□□□□ -0.99
TRAF4-209ENST00000473421 LOC102723971A0A1B0GUV8 181 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 TMEM189A5PLL7 270 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 CORTO00230 105 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 SOCS3O14543 225 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 PGAM2P15259 253 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 NKX2-1P43699 371 aaPredicted RBP8.85□□□□□ -0.99
TRAF4-209ENST00000473421 AKR1C2P52895 323 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 RND3P61587 244 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 LSM3P62310 102 aaKnown RBP8.85□□□□□ -0.99
TRAF4-209ENST00000473421 RNASE12Q5GAN4 147 aaKnown RBP8.85□□□□□ -0.99
TRAF4-209ENST00000473421 SNX29P2Q8IUI4 249 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 OR4B1Q8NGF8 309 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 OR51G1Q8NGK1 321 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 OR1S2Q8NGQ3 325 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 LHFPL5Q8TAF8 219 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 NPIPB3Q92617 1050 aa8.85□□□□□ -0.99
TRAF4-209ENST00000473421 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
TRAF4-209ENST00000473421 TRAV30A0A087WSZ9 112 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 C3orf85A0A1B0GTC6 90 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 PSG1P11464 419 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 AP2S1P53680 142 aaPredicted RBP8.84□□□□□ -0.99
TRAF4-209ENST00000473421 OXA1LQ15070 435 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 FCN2Q15485 313 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 ZNF79Q15937 498 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 SPATA12Q7Z6I5 190 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 LHFPL1Q86WI0 220 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 C6orf223Q8N319 242 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 OR4D10Q8NGI6 311 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 C20orf173Q96LM9 149 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 C17orf77Q96MU5 243 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 KRTAP1-5Q9BYS1 174 aa8.84□□□□□ -0.99
TRAF4-209ENST00000473421 SEPSECSQ9HD40 501 aaKnown RBP8.84□□□□□ -0.99
TRAF4-209ENST00000473421 RD3LP0DJH9 198 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 S100GP29377 79 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 EIF2B2P49770 351 aaKnown RBP8.83□□□□□ -1
TRAF4-209ENST00000473421 MEF2DQ14814 521 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 AARDQ4LEZ3 155 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 FAM78BQ5VT40 261 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 GPR146Q96CH1 333 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 ACY3Q96HD9 319 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 KLK11Q9UBX7 282 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 LINC00588Q9Y4M8 146 aa8.83□□□□□ -1
TRAF4-209ENST00000473421 ZNF705GA8MUZ8 300 aaPredicted RBP8.82□□□□□ -1
TRAF4-209ENST00000473421 TOMM40O96008 361 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms