RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RPS10-NUDT3A0A1W2PQS6 291 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 CEBPZOSA8MTT3 80 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 IGLL5B9A064 214 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 IGLC1P0CG04 106 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 RND2P52198 227 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 PRR20EP86478 221 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 PRR20CP86479 221 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 PRR20DP86480 221 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 PRR20BP86481 221 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 PRR20AP86496 221 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 SPCS2Q15005 226 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 ACTL10Q5JWF8 245 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 Q8NAQ8 132 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 NPIPB3Q92617 1050 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 RAB40CQ96S21 281 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 CLEC5AQ9NY25 188 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 PRR13Q9NZ81 148 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 U3KQE9 123 aa9.65□□□□□ -0.86
CPSF4-210ENST00000469897 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 HELTA6NFD8 242 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 CRYM-AS1A6NIL9 109 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 HNRNPCP07910 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPSF4-210ENST00000469897 OR10J1P30954 320 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-210ENST00000469897 MRPS10P82664 201 aaKnown RBP9.64□□□□□ -0.87
CPSF4-210ENST00000469897 SSBP1Q04837 148 aaKnown RBP9.64□□□□□ -0.87
CPSF4-210ENST00000469897 SURF2Q15527 256 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-210ENST00000469897 PSMG4Q5JS54 123 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 MORN3Q6PF18 240 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-210ENST00000469897 C16orf54Q6UWD8 224 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
CPSF4-210ENST00000469897 TMEM170AQ8WVE7 144 aa9.64□□□□□ -0.87
CPSF4-210ENST00000469897 AKAIN1P0CW23 69 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 SPP1P10451 314 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 SLC25A4P12235 298 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 C4BPBP20851 252 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 EIF2B2P49770 351 aaKnown RBP9.63□□□□□ -0.87
CPSF4-210ENST00000469897 AP2S1P53680 142 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-210ENST00000469897 IL18Q14116 193 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-210ENST00000469897 SLC24A4Q8NFF2 622 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 OR51S1Q8NGJ8 323 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 OR4C16Q8NGL9 310 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 SMIM4Q8WVI0 70 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 DIRAS2Q96HU8 199 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 APLNQ9ULZ1 77 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 TMEM56-RWDD3S4R434 201 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 X6R8D5 127 aa9.63□□□□□ -0.87
CPSF4-210ENST00000469897 IL4P05112 153 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 RD3LP0DJH9 198 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 MIFP14174 115 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 ALDH3B2P48448 385 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 TMEM41BQ5BJD5 291 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 ETFRF1Q6IPR1 90 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 GPR141Q7Z602 305 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 CLVS1Q8IUQ0 354 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-210ENST00000469897 CSNK1G2-AS1Q8NCQ2 148 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 GLMPQ8WWB7 406 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 ACY3Q96HD9 319 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 HRH4Q9H3N8 390 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 KCNIP3Q9Y2W7 256 aa9.62□□□□□ -0.87
CPSF4-210ENST00000469897 ELOA3CA0A087WX78 387 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-210ENST00000469897 ZNF705EA8MWA4 302 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-210ENST00000469897 C11orf94C9JXX5 98 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 CTDSPLO15194 276 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 BUB3O43684 328 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 IFNA10P01566 189 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 NPY1RP25929 384 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 TCTAP57738 103 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 NMSQ5H8A3 153 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 PRRT1Q99946 306 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
CPSF4-210ENST00000469897 TBC1D24Q9ULP9 559 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
CPSF4-210ENST00000469897 ANKRD20A5PA0PJZ0 165 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 TOMM40O96008 361 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 PSG1P11464 419 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 AKR1C4P17516 323 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 Q6ZTC4 211 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 NOXA1Q86UR1 476 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 CENPSQ8N2Z9 138 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 OR51G1Q8NGK1 321 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 IL22RA2Q969J5 263 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 RBKSQ9H477 322 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 U3KQ87 197 aa9.6□□□□□ -0.87
CPSF4-210ENST00000469897 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
CPSF4-210ENST00000469897 KLF9Q13886 244 aaPredicted RBP9.59□□□□□ -0.87
CPSF4-210ENST00000469897 SIGLEC15Q6ZMC9 328 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 ZNF767PQ75MW2 155 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 LGI3Q8N145 548 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 DYNC2LI1Q8TCX1 351 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 DTD1Q8TEA8 209 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 NRN1Q9NPD7 142 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 MCUBQ9NWR8 336 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms