RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 CXorf67Q86X51 503 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 LYG1Q8N1E2 194 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 OR4F17Q8NGA8 305 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 SLC25A40Q8TBP6 338 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 S1PR3Q99500 378 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 WNT10AQ9GZT5 417 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 GSX1Q9H4S2 264 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 TMEM140Q9NV12 185 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 C1RLQ9NZP8 487 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 FOXA2Q9Y261 457 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 RAI1Q7Z5J4 1906 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 ZNF469Q96JG9 3925 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 LOC105371242A0A075B767 164 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 TRAV30A0A087WSZ9 112 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 IGHV3-43A0A0B4J1X8 118 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 WNT9BO14905 357 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 OR2J3O76001 311 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 IGHV3-43DP0DP04 118 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 USF1P22415 310 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 TAS2R45P59539 299 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 ALKBH6Q3KRA9 238 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 FAM162BQ5T6X4 162 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 FAM214BQ7L5A3 538 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 LRRC75A-AS1Q8N1F1 130 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 WFDC11Q8NEX6 87 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 DDB2Q92466 427 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 NABP2Q9BQ15 211 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 ALKBH7Q9BT30 221 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 TUBG2Q9NRH3 451 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 TMEM14BQ9NUH8 114 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 ABCA2Q9BZC7 2435 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 TRAV3A0A0B4J244 114 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 A0A1W2PPR1 153 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 FAM181BA6NEQ2 426 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 M0R1X1 148 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 SPINK4O60575 86 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 HINT1P49773 126 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-205ENST00000469550 SMIM21Q3B7S5 101 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 FBLN7Q53RD9 439 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 MRPL54Q6P161 138 aaKnown RBP7.79□□□□□ -1.16
HDAC3-205ENST00000469550 UNQ5815/PRO19632Q6UWF5 114 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 WDR82Q6UXN9 313 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 FAM19A2Q8N3H0 131 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 OR4S2Q8NH73 311 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 RFESDQ8TAC1 157 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 ZNF503Q96F45 646 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 OR2V2Q96R30 315 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 CHRDL1Q9BU40 450 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 SAP30LQ9HAJ7 183 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 OBP2BQ9NPH6 170 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 NAV3Q8IVL0 2385 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 DEFB108AA8MXU0 73 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 HSBP1O75506 76 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 PPBPP02775 128 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 RHOGP84095 191 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 SLAQ13239 276 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 FXYD3Q14802 87 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 TNXAQ16473 311 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 POU2AF1Q16633 256 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 LRRC10Q5BKY1 277 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 ZNF826PQ6ZT77 177 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 KLF14Q8TD94 323 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-205ENST00000469550 ENY2Q9NPA8 101 aa7.79□□□□□ -1.16
HDAC3-205ENST00000469550 TRAV34A0A0B4J273 112 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 C2orf70A6NJV1 201 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 F2RL2O00254 374 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 CRXO43186 299 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-205ENST00000469550 CELA3BP08861 270 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 IGLL1P15814 213 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 NTF3P20783 257 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 REG1BP48304 166 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 TCL1AP56279 114 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 UBE2G1P62253 170 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 SLC35B1P78383 322 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 EBLN2Q6P2I7 272 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 VKORC1L1Q8N0U8 176 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-205ENST00000469550 GRAMD2BQ96HH9 432 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 MRPL32Q9BYC8 188 aaKnown RBP7.78□□□□□ -1.16
HDAC3-205ENST00000469550 IFI27L2Q9H2X8 130 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 PLEKHA3Q9HB20 300 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 GNG12Q9UBI6 72 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 ZNF257Q9Y2Q1 563 aa7.78□□□□□ -1.16
HDAC3-205ENST00000469550 C8orf88P0DMB2 117 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 LCN12Q6JVE5 192 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 VWA1Q6PCB0 445 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 PRSS57Q6UWY2 283 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 TPRX1Q8N7U7 411 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 NCOR1P1Q9H4R4 102 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 C12orf49Q9H741 205 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 ST20Q9HBF5 79 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 SERTAD4Q9NUC0 356 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 METRNQ9UJH8 293 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 NIPBLQ6KC79 2804 aaeCLIP7.77□□□□□ -1.17
HDAC3-205ENST00000469550 IGHV3-64DA0A0J9YX35 117 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 M0R2Z0 102 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 ACTL6BO94805 426 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 MGST1P10620 155 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms