RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 OGNP20774 298 aaKnown RBP3.02□□□□□ -1.93
SCFD1-205ENST00000469043 RPS3P23396 243 aaKnown RBP eCLIP3.02□□□□□ -1.93
SCFD1-205ENST00000469043 SDC4P31431 198 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 UBE2SQ16763 222 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 LYRM7Q5U5X0 104 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-205ENST00000469043 ZFP62Q8NB50 900 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-205ENST00000469043 OR10D4PQ8NGN7 298 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 RBPMSQ93062 196 aaKnown RBP3.02□□□□□ -1.93
SCFD1-205ENST00000469043 L3HYPDHQ96EM0 354 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 ADAT3Q96EY9 351 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-205ENST00000469043 C2orf50Q96LR7 162 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 IP6K3Q96PC2 410 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 NDFIP1Q9BT67 221 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 IMUPQ9GZP8 106 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 EFCAB1Q9HAE3 211 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 SCN4AP35499 1836 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 NRXN2Q9P2S2 1712 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 RIC1Q4ADV7 1423 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 RTL9Q8NET4 1388 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 OBSL1O75147 1896 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 COL27A1Q8IZC6 1860 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-205ENST00000469043 ANKRD31Q8N7Z5 1873 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 LAMA4Q16363 1823 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 TRBV6-6A0A0A6YYG2 114 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 A0A1B0GV90 55 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 ZNF98A6NK75 572 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 MIF4GDA9UHW6 222 aaKnown RBP3.01□□□□□ -1.93
SCFD1-205ENST00000469043 TMX2-CTNND1H3BSU7 103 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 K7EP13 123 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 PHOX2AO14813 284 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 BET1O15155 118 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 RBFOX2O43251 390 aaKnown RBP eCLIP3.01□□□□□ -1.93
SCFD1-205ENST00000469043 ZNF324O75467 553 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-205ENST00000469043 IGKV3-15P01624 115 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 TRGV3P03979 118 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 DBIP07108 87 aaKnown RBP3.01□□□□□ -1.93
SCFD1-205ENST00000469043 NTF3P20783 257 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 GABRA2P47869 451 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 POLR2HP52434 150 aaKnown RBP3.01□□□□□ -1.93
SCFD1-205ENST00000469043 AKR1C2P52895 323 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 FKBP1AP62942 108 aaKnown RBP3.01□□□□□ -1.93
SCFD1-205ENST00000469043 SSX8Q7RTT4 187 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 CROCCP2Q86T23 111 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 ZNF709Q8N972 641 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 ZNF285Q96NJ3 590 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 LHX9Q9NQ69 397 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 TNFRSF19Q9NS68 423 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 LAMTOR3Q9UHA4 124 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 PRO0461Q9UI25 63 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 HSPB8Q9UJY1 196 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 PCTPQ9UKL6 214 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 TCHHQ07283 1943 aa3.01□□□□□ -1.93
SCFD1-205ENST00000469043 DLEC1Q9Y238 1755 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 IGSF9BQ9UPX0 1349 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 LRRC37AA6NMS7 1700 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 MYH6P13533 1939 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 MYH8P13535 1937 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 ANAPC1Q9H1A4 1944 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 IGKV1D-43A0A0B4J1Z2 117 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 TRAV41A0A0B4J266 112 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 A0A1B0GW54 56 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 A6NED7 52 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 A8MWP4 228 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 C5orf58C9J3I9 102 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 TRAPPC2LH3BP13 241 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 UBE2L6O14933 153 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 IFNA10P01566 189 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 C1QCP02747 245 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST1H2BOP23527 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST1H2BBP33778 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 CA5AP35218 305 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 LPAR6P43657 344 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST1H2BDP58876 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 RPS11P62280 158 aaKnown RBP eCLIP3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST1H2BCP62807 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 RPL30P62888 115 aaKnown RBP3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST2H2BEQ16778 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST2H2BFQ5QNW6 126 aaPredicted RBP3□□□□□ -1.93
SCFD1-205ENST00000469043 PRSS54Q6PEW0 395 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 AMTNQ6UX39 209 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 ADM2Q7Z4H4 148 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 C11orf42Q8N5U0 333 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 H1FXQ92522 213 aaKnown RBP3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST1H2BHQ93079 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST1H2BNQ99877 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 HIST1H2BMQ99879 126 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 OR2J1Q9GZK6 312 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 TRAPPC2LQ9UL33 140 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 FER1L6Q2WGJ9 1857 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 MYO10Q9HD67 2058 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 PSME4Q14997 1843 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 DUOX1Q9NRD9 1551 aa3□□□□□ -1.93
SCFD1-205ENST00000469043 A0A096LNJ9 63 aa2.99□□□□□ -1.93
SCFD1-205ENST00000469043 SMIM24O75264 130 aa2.99□□□□□ -1.93
SCFD1-205ENST00000469043 IGKV1D-33P01593 117 aa2.99□□□□□ -1.93
SCFD1-205ENST00000469043 IGKV1-33P01594 117 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms