RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 HINT2Q9BX68 163 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 TSPAN9O75954 239 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 RPL27AP46776 148 aaKnown RBP13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 SLC35E3Q7Z769 313 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 P2RX4Q99571 388 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 SMCO3A2RU48 225 aa13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 ATP6V0E1O15342 81 aa13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 RNASE2P10153 161 aaKnown RBP13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 ERHP84090 104 aaKnown RBP13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 RAB31Q13636 194 aa13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 ARSJQ5FYB0 599 aaPredicted RBP13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 TEPPQ6URK8 271 aa13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 GNG13Q9P2W3 67 aa13.3□□□□□ -0.28
EXOSC3-203ENST00000465229 TEX22C9J3V5 150 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 IGF1P05019 195 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 TMEM95Q3KNT9 176 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 LURAP1LQ8IV03 231 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 OR10W1Q8NGF6 305 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 SGMS2Q8NHU3 365 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 ABHD5Q8WTS1 349 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 MGST2Q99735 147 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
EXOSC3-203ENST00000465229 APELAP0DMC3 54 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 OR13C7P0DN81 318 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 GPX4P36969 197 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 PRIMA1Q86XR5 153 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 MRPL41Q8IXM3 137 aaKnown RBP13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 RXFP4Q8TDU9 374 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 CACNG8Q8WXS5 425 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 RAB24Q969Q5 203 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 NOL4LQ96MY1 436 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 LINC00527Q9UJ94 153 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 TSPAN4O14817 238 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 RPL29P47914 159 aaKnown RBP13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 RHEBQ15382 184 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 ASPHD1Q5U4P2 390 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 TMEM144Q7Z5S9 345 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 MANBALQ9NQG1 85 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 SERTAD4Q9NUC0 356 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 PXMP4Q9Y6I8 212 aa13.28□□□□□ -0.28
EXOSC3-203ENST00000465229 IGLC7A0M8Q6 106 aa13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 G3V318 75 aa13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 AP4M1O00189 453 aa13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 CRIP2P52943 208 aaPredicted RBP13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 SUB1P53999 127 aaKnown RBP eCLIP13.27□□□□□ -0.295e-9■■■■■ 27.8
EXOSC3-203ENST00000465229 FAM122CQ6P4D5 195 aa13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 RNASEH2CQ8TDP1 164 aaKnown RBP13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 C16orf95Q9H693 158 aa13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 SLC25A22Q9H936 323 aa13.27□□□□□ -0.29
EXOSC3-203ENST00000465229 ZFP92A6NM28 416 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 YIF1AO95070 293 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 NDUFA7O95182 113 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 AREGP15514 252 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 AKIRIN2Q53H80 203 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 AWAT1Q58HT5 328 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 C19orf54Q5BKX5 351 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 CYB561D1Q8N8Q1 229 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 OR2T6Q8NHC8 308 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 SRSF8Q9BRL6 282 aaKnown RBP13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 TUBA4BQ9H853 241 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 SMCO4Q9NRQ5 59 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 ZNF580Q9UK33 172 aa13.26□□□□□ -0.29
EXOSC3-203ENST00000465229 PSMB3P49720 205 aa13.25□□□□□ -0.29
EXOSC3-203ENST00000465229 CD69Q07108 199 aa13.25□□□□□ -0.29
EXOSC3-203ENST00000465229 ECSCRQ19T08 205 aa13.25□□□□□ -0.29
EXOSC3-203ENST00000465229 TMEM88Q6PEY1 159 aa13.25□□□□□ -0.29
EXOSC3-203ENST00000465229 UNQ5815/PRO19632Q6UWF5 114 aa13.25□□□□□ -0.29
EXOSC3-203ENST00000465229 LINC01006Q8NI28 216 aa13.25□□□□□ -0.29
EXOSC3-203ENST00000465229 TRAV41A0A0B4J266 112 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 C7orf77A4D0Y5 90 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 PRR20EP86478 221 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 PRR20CP86479 221 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 PRR20DP86480 221 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 PRR20BP86481 221 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 PRR20AP86496 221 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 PVRIGQ6DKI7 326 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 CBLN2Q8IUK8 224 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 TMEM68Q96MH6 324 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 A0A1W2PPV4 95 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 M0R036 132 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 REG1AP05451 166 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 PPIFP30405 207 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 B2MP61769 119 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 MIC13Q5XKP0 118 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 TTC9CQ8N5M4 171 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 OR5T1Q8NG75 326 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 NIPSNAP3BQ9BS92 247 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 SLC45A2Q9UMX9 530 aa13.24□□□□□ -0.29
EXOSC3-203ENST00000465229 TMEM250H0YL14 139 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 H3BQ15 152 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 CTRB1P17538 263 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 GAMTQ14353 236 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms