RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CYB5R2Q6BCY4 276 aa13.65□□□□□ -0.22
TCOF1-206ENST00000445265 POLEQ07864 2286 aa13.65□□□□□ -0.22
TCOF1-206ENST00000445265 C10orf55Q5SWW7 151 aa13.65□□□□□ -0.22
TCOF1-206ENST00000445265 RNASE6Q93091 150 aaKnown RBP13.65□□□□□ -0.22
TCOF1-206ENST00000445265 SSBP4Q9BWG4 385 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-206ENST00000445265 CA1P00915 261 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-206ENST00000445265 Q6ZR03 302 aa13.65□□□□□ -0.22
TCOF1-206ENST00000445265 NCOR1P1Q9H4R4 102 aa13.65□□□□□ -0.22
TCOF1-206ENST00000445265 NUDT10Q8NFP7 164 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 NUDT11Q96G61 164 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 C2orf88Q9BSF0 95 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 FGF23Q9GZV9 251 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-206ENST00000445265 TMEM131Q92545 1883 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 LEMD1Q68G75 181 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 PVRIGQ6DKI7 326 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 C21orf62Q9NYP8 219 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 J3KRW8 73 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 VDAC2P45880 294 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-206ENST00000445265 NDUFS6O75380 124 aaKnown RBP13.64□□□□□ -0.23
TCOF1-206ENST00000445265 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-206ENST00000445265 MYOD1P15172 320 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 TMPRSS3P57727 454 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 TMEM200BQ69YZ2 307 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 LPAR2Q9HBW0 351 aa13.64□□□□□ -0.23
TCOF1-206ENST00000445265 TRAV9-2A0A087WT02 112 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 GAGE10A6NGK3 116 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 RNASE2P10153 161 aaKnown RBP13.63□□□□□ -0.23
TCOF1-206ENST00000445265 TMEM190Q8WZ59 177 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 C16orf92Q96LL3 132 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 TMEM14BQ9NUH8 114 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 H0YJW9 148 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 RPL24P83731 157 aaKnown RBP13.63□□□□□ -0.23
TCOF1-206ENST00000445265 LYRM7Q5U5X0 104 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 CENPVQ7Z7K6 275 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-206ENST00000445265 C8orf46Q8TAG6 207 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 PCDH15Q96QU1 1955 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 PRELID3AQ96N28 172 aa13.63□□□□□ -0.23
TCOF1-206ENST00000445265 HERVK_113P61574 105 aa13.62□□□□□ -0.23
TCOF1-206ENST00000445265 FBLL1A6NHQ2 334 aaKnown RBP13.62□□□□□ -0.23
TCOF1-206ENST00000445265 SCGB1D4Q6XE38 83 aa13.62□□□□□ -0.23
TCOF1-206ENST00000445265 NUP37Q8NFH4 326 aa13.62□□□□□ -0.23
TCOF1-206ENST00000445265 PCNX3Q9H6A9 2034 aa13.62□□□□□ -0.23
TCOF1-206ENST00000445265 NBR2O15453 112 aa13.62□□□□□ -0.23
TCOF1-206ENST00000445265 PRSS8Q16651 343 aa13.62□□□□□ -0.23
TCOF1-206ENST00000445265 ZNF474Q6S9Z5 364 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-206ENST00000445265 TMEM178BH3BS89 294 aa13.62□□□□□ -0.23
TCOF1-206ENST00000445265 FAM53AQ6NSI3 398 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-206ENST00000445265 MGPP08493 103 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 WNK2Q9Y3S1 2297 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 CFHR2P36980 270 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 UQCRFS1P47985 274 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 OR10J6PQ8NGY7 276 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 TRGV9Q99603 122 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 IGKV3-7A0A075B6H7 116 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 TCTAP57738 103 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 NUTF2P61970 127 aaKnown RBP13.61□□□□□ -0.23
TCOF1-206ENST00000445265 RNF125Q96EQ8 232 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 A8MWP6 167 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 C15orf65H3BRN8 121 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 IGKV1-16P04430 117 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 DLX6P56179 175 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 ARPC1AQ92747 370 aa13.61□□□□□ -0.23
TCOF1-206ENST00000445265 A0A1W2PS18 150 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 LOXL3P58215 753 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 ZNF414Q96IQ9 312 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 LINC00614P0C842 121 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 NEU4Q8WWR8 484 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-206ENST00000445265 NUDT3O95989 172 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 FAM71F2Q6NXP2 309 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 CHCHD1Q96BP2 118 aaKnown RBP13.6□□□□□ -0.23
TCOF1-206ENST00000445265 NPPCP23582 126 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 S4R3C0 116 aa13.6□□□□□ -0.23
TCOF1-206ENST00000445265 IGHV3-35A0A0C4DH35 117 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-206ENST00000445265 SCGB1C2P0DMR2 95 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 GATA4P43694 442 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 DMRTA1Q5VZB9 504 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 ORMDL3Q8N138 153 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 SFTPCP11686 197 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 Q0VG73 95 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 TMEM249Q2WGJ8 235 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 DTX1Q86Y01 620 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 FBXL7Q9UJT9 491 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 IGLV1-44P01699 117 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 NIT1Q86X76 327 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 EEF1AKMT3Q96AZ1 226 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 GPX1P07203 203 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 Q6ZS92 163 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 MRPL27Q9P0M9 148 aaKnown RBP13.59□□□□□ -0.23
TCOF1-206ENST00000445265 PSG8Q9UQ74 426 aa13.59□□□□□ -0.23
TCOF1-206ENST00000445265 ID1P41134 155 aa13.58□□□□□ -0.24
TCOF1-206ENST00000445265 MRPL52Q86TS9 123 aaKnown RBP13.58□□□□□ -0.24
TCOF1-206ENST00000445265 NEUROG1Q92886 237 aa13.58□□□□□ -0.24
TCOF1-206ENST00000445265 CGB1A6NKQ9 187 aa13.58□□□□□ -0.24
TCOF1-206ENST00000445265 YPEL3P61236 119 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-206ENST00000445265 SRSF6Q13247 344 aaKnown RBP13.58□□□□□ -0.24
TCOF1-206ENST00000445265 IGHV2-26A0A0B4J1V2 119 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 FABP2P12104 132 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 Q1RN00 199 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms