RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 RBMS3Q6XE24 437 aaKnown RBP3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 BRD3OSQ6XYD6 125 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 C9orf139Q6ZV77 190 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 TTC9CQ8N5M4 171 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 Q8N9W7 124 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 THAP8Q8NA92 274 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 TMEM116Q8NCL8 245 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR5R1Q8NH85 324 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 C17orf50Q8WW18 174 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 ACY3Q96HD9 319 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 RBM14Q96PK6 669 aaKnown RBP3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 PFDN5Q99471 154 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 RNF2Q99496 336 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 MGST2Q99735 147 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 SSX3Q99909 188 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 SLC25A33Q9BSK2 321 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 RSG1Q9BU20 258 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 MAP1LC3BQ9GZQ8 125 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 EIF5A2Q9GZV4 153 aaKnown RBP3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 SLC45A2Q9UMX9 530 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 MOB4Q9Y3A3 225 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 PXMP4Q9Y6I8 212 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 NOTCH2Q04721 2471 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 AKAP9Q99996 3911 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 IGHV3OR16-10A0A075B7F0 116 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 TRAV30A0A087WSZ9 112 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 IGHV7-81A0A0B4J1V7 117 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 TCRBV4S1A1TA0A5B7 111 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 TMEM218A2RU14 115 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 A6NDX4 124 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 RBFOX3A6NFN3 312 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 ZFP92A6NM28 416 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 H3BUX3 64 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 I3L2K1 104 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 NDUFS6O75380 124 aaKnown RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 CXorf1O96002 111 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 FSHBP01225 129 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 AMY1AP04745 511 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 REG1AP05451 166 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 CD5P06127 495 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 GYPEP15421 78 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 CTRB1P17538 263 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR10J1P30954 320 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 S100A7P31151 101 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 NPBWR1P48145 328 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 CDC34P49427 236 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 PSMB3P49720 205 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 FHITP49789 147 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 RND2P52198 227 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 MFAP4P55083 255 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 B2MP61769 119 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 SSBP2P81877 361 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 SCGB2A2Q13296 93 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 GUK1Q16774 197 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 KLK9Q2XQG4 91 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 AKIRIN2Q53H80 203 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 KHDC3LQ587J8 217 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 KLF17Q5JT82 389 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 RUSC1-AS1Q66K80 236 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 ACSM6Q6P461 480 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 FAM122CQ6P4D5 195 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 SPSB3Q6PJ21 355 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 LCN15Q6UWW0 184 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 SLC35E3Q7Z769 313 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 S100A7AQ86SG5 101 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 RPP25LQ8N5L8 163 aaKnown RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 C5orf56Q8N8D9 126 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 BPIFCQ8NFQ6 507 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR1L4Q8NGR5 311 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR4X1Q8NH49 305 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR2T6Q8NHC8 308 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 SGMS2Q8NHU3 365 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 FAM110DQ8TAY7 271 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 SUN5Q8TC36 379 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 PIFOQ8TCI5 191 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 GATAD1Q8WUU5 269 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 NPIPB3Q92617 1050 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 NARS2Q96I59 477 aaKnown RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 ZNF48Q96MX3 618 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 ATP6V0BQ99437 205 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 TRGV9Q99603 122 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 TXN2Q99757 166 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 TXNDC17Q9BRA2 123 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 GGTLC1Q9BX51 225 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 MRPL32Q9BYC8 188 aaKnown RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 DNAJC4Q9NNZ3 241 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 MANBALQ9NQG1 85 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 GAR1Q9NY12 217 aaKnown RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 TECRQ9NZ01 308 aaKnown RBP3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 KLK9Q9UKQ9 250 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 RFNGQ9Y644 331 aa3.13□□□□□ -1.91
HMGB1P37-201ENST00000439613 FLNBO75369 2602 aaKnown RBP3.12□□□□□ -1.91
HMGB1P37-201ENST00000439613 ACANP16112 2415 aa3.12□□□□□ -1.91
HMGB1P37-201ENST00000439613 OTOGQ6ZRI0 2925 aa3.12□□□□□ -1.91
HMGB1P37-201ENST00000439613 IGLV11-55A0A075B6I3 123 aa3.12□□□□□ -1.91
HMGB1P37-201ENST00000439613 IGKV1OR2-108A0A075B7D4 117 aa3.12□□□□□ -1.91
HMGB1P37-201ENST00000439613 TRAV41A0A0B4J266 112 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms