RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ZNF660Q6AZW8 331 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 FAM231DQ6ZW35 169 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 FA2HQ7L5A8 372 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 CYP4Z1Q86W10 505 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF664Q8N3J9 261 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 LINC00337Q8N6G1 96 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF676Q8N7Q3 588 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 ASCC1Q8N9N2 400 aaKnown RBP1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR8S1Q8NH09 359 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZFAND1Q8TCF1 268 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 MYOZ3Q8TDC0 251 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 PPP1R36Q96LQ0 422 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 GAFA1Q96PS6 74 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR2A7Q96R45 310 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 DPY30Q9C005 99 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR2H1Q9GZK4 316 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 SRRQ9GZT4 340 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 C6orf62Q9GZU0 229 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 SLC22A4Q9H015 551 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 INIPQ9NRY2 104 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 VPS29Q9UBQ0 182 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 SLC7A11Q9UPY5 501 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF443Q9Y2A4 671 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF706Q9Y5V0 76 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 FAT3Q8TDW7 4589 aa1.56□□□□□ -2.16
HMGB3P12-201ENST00000438745 IGHV2-26A0A0B4J1V2 119 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 LOC102725191A0A1B0GVB3 256 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 ANKRD20A5PA0PJZ0 165 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 LY6LH3BQJ8 138 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 RFXANKO14593 260 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 TOR1AO14656 332 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 MPZL2O60487 215 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 IGKV1D-33P01593 117 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 IGKV1-33P01594 117 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 RLN2P04090 185 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 HTN3P15516 51 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 CD40LGP29965 261 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 GPR4P46093 362 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 RPL37AP61513 92 aaKnown RBP1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 MEF2CQ06413 473 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 CDK5R1Q15078 307 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR4D1Q15615 310 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 TMEM241Q24JQ0 296 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 SPIN4Q56A73 249 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 LCN8Q6JVE9 175 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF773Q6PK81 442 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 SMARCD3Q6STE5 483 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 OLIG3Q7RTU3 272 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 TMEM144Q7Z5S9 345 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 KRTAP13-1Q8IUC0 172 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 C10orf107Q8IVU9 208 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR5D16Q8NGK9 328 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR5H2Q8NGV7 314 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 STAG3L4Q8TBR4 150 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 APOBEC3DQ96AK3 386 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 SLC25A44Q96H78 314 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 SPACA5Q96QH8 159 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR7D2Q96RA2 312 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 SDF2Q99470 211 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 MAP1LC3CQ9BXW4 147 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 DERL2Q9GZP9 239 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 ABCG5Q9H222 651 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 TXNIPQ9H3M7 391 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 DUSP21Q9H596 190 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 TAS2R1Q9NYW7 299 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 MRM2Q9UI43 246 aaKnown RBP1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 HHLA2Q9UM44 414 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 TFR2Q9UP52 801 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 ATP6V1DQ9Y5K8 247 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 R4GN34 69 aa1.55□□□□□ -2.16
HMGB3P12-201ENST00000438745 TRAV36DV7A0A075B6V5 113 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 A0A087WUJ7 227 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 TRAV41A0A0B4J266 112 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 A0A1B0GW64 132 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 A0A1W2PRG6 482 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 GMNCA6NCL1 334 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ARRDC5A6NEK1 342 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR2AT4A6NND4 320 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 C17orf98A8MV24 154 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 OOSP1A8MZH6 123 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 C9JQL5 133 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 G3V318 75 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 FAAHO00519 579 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 BHLHE40O14503 412 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 CDIPTO14735 213 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 SGCEO43556 437 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 RBP4P02753 201 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 TRGV3P03979 118 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF728P0DKX0 622 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 COX5BP10606 129 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 NUDT2P50583 147 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 CCL18P55774 89 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 EDDM3BP56851 147 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 TPPP2P59282 170 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 SSX1Q16384 188 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ACTBL2Q562R1 376 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 PDZD11Q5EBL8 140 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 SYT6Q5T7P8 510 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 C5orf46Q6UWT4 87 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms