RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 HIST1H1TP22492 207 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 PEBP1P30086 187 aaKnown RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 SRIP30626 198 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 FCGR2BP31994 310 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 DUTP33316 252 aaKnown RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ID1P41134 155 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 PTGDSP41222 190 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 GPR1P46091 355 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 IER3P46695 156 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF146Q15072 292 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF726P1Q15940 193 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 LYRM7Q5U5X0 104 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZFAND6Q6FIF0 208 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 TMEM136Q6ZRR5 245 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 SHISA6Q6ZSJ9 500 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 TEX29Q8N6K0 151 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF525Q8N782 197 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF645Q8N7E2 425 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 TPRX1Q8N7U7 411 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 OR2M3Q8NG83 312 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 OR10G6Q8NH81 332 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 TMEM54Q969K7 222 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 APOBEC3DQ96AK3 386 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 CHCHD1Q96BP2 118 aaKnown RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 DNAJA3Q96EY1 480 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ADAT3Q96EY9 351 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ARHGAP5-AS1Q96IT6 56 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 ADTRPQ96IZ2 230 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 TMEM147Q9BVK8 224 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 SPANXDQ9BXN6 97 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 MAP1LC3CQ9BXW4 147 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 VPREB3Q9UKI3 123 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 HEBP2Q9Y5Z4 205 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 KCNE3Q9Y6H6 103 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 RLFQ13129 1914 aa2.63□□□□□ -1.99
SDCBPP3-201ENST00000419629 A0A087X0K7 114 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 IGHV3-20A0A0C4DH32 117 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 TEX50A0A1B0GTY4 177 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 MBLAC1A4D2B0 266 aaPredicted RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 C2orf70A6NJV1 201 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 FABP5P3A8MUU1 101 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 F2Z2F3 143 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 H3BSH0 61 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 M0QXV9 152 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 CHST1O43916 411 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SRSF10O75494 262 aaKnown RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SCGB2A1O75556 95 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 FCN3O75636 299 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OR2J3O76001 311 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 UTS2O95399 124 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 BGLAPP02818 100 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SMIM13P0DJ93 91 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 CT45A10P0DMU9 189 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF823P16415 610 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 GATA2P23769 480 aaPredicted RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 BLVRBP30043 206 aaPredicted RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 G6PCP35575 357 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ATP5J2P56134 94 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SLC35B1P78383 322 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 PSG4Q00888 419 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 MEF2CQ06413 473 aaPredicted RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF141Q15928 474 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 CEACAM16Q2WEN9 425 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SP6Q3SY56 376 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 NMSQ5H8A3 153 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 LCN12Q6JVE5 192 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 EBLN2Q6P2I7 272 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 RNASEKQ6P5S7 137 aaKnown RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 Q6Q795 121 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 LINC00696Q6ZRV3 163 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 Q6ZS49 121 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 Q6ZVQ6 151 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 TMEM25Q86YD3 366 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF740Q8NDX6 193 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OR8B12Q8NGG6 310 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OR5D13Q8NGL4 314 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OR13C6PQ8NH95 151 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OR1F12Q8NHA8 337 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OCC1Q8TAD7 63 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZPLD1Q8TCW7 415 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF721Q8TF20 911 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 CT55Q8WUE5 264 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 NRGNQ92686 78 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ST6GALNAC6Q969X2 333 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 CLDN23Q96B33 292 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SPAG8Q99932 426 aaPredicted RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OCR1Q9BZK8 76 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 TMEM222Q9H0R3 208 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 MAP1LC3AQ9H492 121 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SLC25A22Q9H936 323 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 HES4Q9HCC6 221 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 SH2D2AQ9NP31 389 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 ZNF331Q9NQX6 463 aaPredicted RBP2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 OSTCQ9NRP0 149 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 CLCF1Q9UBD9 225 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 B9D1Q9UPM9 204 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 NUP210LQ5VU65 1888 aa2.62□□□□□ -1.99
SDCBPP3-201ENST00000419629 NINQ8N4C6 2090 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms