RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IL15RAQ13261 267 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 EBI3Q14213 229 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 SLC9A3R2Q15599 337 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 POU2AF1Q16633 256 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 SP6Q3SY56 376 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 RNF212Q495C1 297 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 NMSQ5H8A3 153 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 CYB5R2Q6BCY4 276 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 SPNS3Q6ZMD2 512 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 PDPNQ86YL7 162 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 PDZD9Q8IXQ8 264 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 SELENOHQ8IZQ5 122 aaKnown RBP3.11□□□□□ -1.91
CLK1-203ENST00000409769 DYNAPQ8N1N2 210 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 C12orf45Q8N5I9 185 aaPredicted RBP3.11□□□□□ -1.91
CLK1-203ENST00000409769 TCTEX1D1Q8N7M0 179 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 SLC35G3Q8N808 338 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 DRAXINQ8NBI3 349 aaPredicted RBP3.11□□□□□ -1.91
CLK1-203ENST00000409769 KLHL30-AS1Q8NEE0 82 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 OR10X1Q8NGY0 326 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 OR51H1Q8NH63 302 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 CD300LFQ8TDQ1 290 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 CASTOR1Q8WTX7 329 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 C17orf50Q8WW18 174 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 LHX4Q969G2 390 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 RPEQ96AT9 228 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 MALSU1Q96EH3 234 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 SEC22AQ96IW7 307 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 ADTRPQ96IZ2 230 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 PHB2Q99623 299 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 MRPL20Q9BYC9 149 aaKnown RBP3.11□□□□□ -1.91
CLK1-203ENST00000409769 RAB18Q9NP72 206 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 KCNIP3Q9Y2W7 256 aa3.11□□□□□ -1.91
CLK1-203ENST00000409769 F8P00451 2351 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 TEX15Q9BXT5 2789 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 IGHV3OR16-12A0A075B7B8 117 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 A0A0G2JRQ6 117 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 G3V3Q6 166 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 NPFFO15130 113 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 PITX3O75364 302 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 ADAP1O75689 374 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 OR2A4O95047 310 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 S1PR2O95136 353 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 IGKV1-5P01602 117 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 IGLV2-23P01705 113 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 GAPDHP04406 335 aaKnown RBP3.1□□□□□ -1.91
CLK1-203ENST00000409769 IGKV1-16P04430 117 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 RRASP10301 218 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 SLC25A6P12236 298 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 ANXA3P12429 323 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 VDAC1P21796 283 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 CD1BP29016 333 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 SAA4P35542 130 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 CEACAM3P40198 252 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 LPAR6P43657 344 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 REG1BP48304 166 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 RAB13P51153 203 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 DYNLT3P51808 116 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 H2BFSP57053 126 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 BPIFB3P59826 476 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 OR2B11Q5JQS5 317 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 GPR157Q5UAW9 335 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 BRD3OSQ6XYD6 125 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 LYZL2Q7Z4W2 148 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 TGIF2LXQ8IUE1 241 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 ZNF695Q8IW36 515 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 STHQ8IWL8 128 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 PUSL1Q8N0Z8 303 aaKnown RBP3.1□□□□□ -1.91
CLK1-203ENST00000409769 LGI3Q8N145 548 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 Q8N6K4 173 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 OR4S2Q8NH73 311 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 COQ8AQ8NI60 647 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 TCTEX1D2Q8WW35 142 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 RBPMSQ93062 196 aaKnown RBP3.1□□□□□ -1.91
CLK1-203ENST00000409769 LSM10Q969L4 123 aaKnown RBP3.1□□□□□ -1.91
CLK1-203ENST00000409769 RBMXL1Q96E39 390 aaKnown RBP3.1□□□□□ -1.91
CLK1-203ENST00000409769 OR10C1Q96KK4 312 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 OR2A7Q96R45 310 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 RNF5Q99942 180 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 MED28Q9H204 178 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 SLC35D1Q9NTN3 355 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 COA4Q9NYJ1 87 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 COMMD9Q9P000 198 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 RNF24Q9Y225 148 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 PRELID3BQ9Y3B1 194 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 WASHC3Q9Y3C0 194 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 HILPDAQ9Y5L2 63 aa3.1□□□□□ -1.91
CLK1-203ENST00000409769 HIVEP2P31629 2446 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 TRAV9-2A0A087WT02 112 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 IGHV3-72A0A0B4J1Y9 119 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 PIGBOS1A0A0B4J2F0 54 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 A0A1W2PRD5 423 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 A0A1W2PRF3 423 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 A0A1W2PRM7 423 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 GOSR2O14653 212 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 CHEK1O14757 476 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 SSNA1O43805 119 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 NDUFA3O95167 84 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 SIX6O95475 246 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 CRYZL1O95825 349 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 APOA2P02652 100 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms