RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 IGLC1P0CG04 106 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 NAT1P18440 290 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 ETV6P41212 452 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 NUTF2P61970 127 aaKnown RBP8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 MXD1Q05195 221 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 BSXQ3C1V8 233 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 NRN1Q9NPD7 142 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 TMED3Q9Y3Q3 217 aa8.3□□□□□ -1.08
SPTLC1P3-201ENST00000403408 A0A0G2JRQ6 117 aa8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 F6UB75 175 aa8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 BUB3O43684 328 aa8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 HNRNPCP07910 306 aaKnown RBP eCLIP8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 ELK1P19419 428 aa8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 NKX2-1P43699 371 aaPredicted RBP8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 DHODHQ02127 395 aa8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 TMEM170AQ8WVE7 144 aa8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 BORCS5Q969J3 196 aa8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SAV1Q9H4B6 383 aaPredicted RBP8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SEPSECSQ9HD40 501 aaKnown RBP8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 FAM212BQ9NTI7 297 aaPredicted RBP8.29□□□□□ -1.08
SPTLC1P3-201ENST00000403408 A0A0A6YYH2 397 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 A6NJ64 397 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SOCS3O14543 225 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 HRH1P35367 487 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SNCAP37840 140 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 CBX5P45973 191 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 RPL5P46777 297 aaKnown RBP8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 DAD1P61803 113 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SNRPD3P62318 126 aaKnown RBP8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 FCN2Q15485 313 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 ZNF79Q15937 498 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 IDNKQ5T6J7 187 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 PRSS54Q6PEW0 395 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 CMTM1Q8IZ96 169 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 C15orf53Q8NAA6 179 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 ATG101Q9BSB4 218 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
SPTLC1P3-201ENST00000403408 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 TEX48A0A1B0GUV7 120 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 PLAC8L1A1L4L8 177 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 HLA-DMAP28067 261 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 OPRK1P41145 380 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 SIGLEC15Q6ZMC9 328 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 LYPD1Q8N2G4 141 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 OR5H2Q8NGV7 314 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 C17orf77Q96MU5 243 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 IFT46Q9NQC8 304 aa8.27□□□□□ -1.09
SPTLC1P3-201ENST00000403408 RPS10-NUDT3A0A1W2PQS6 291 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 NUDT3O95989 172 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 IL4P05112 153 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 RND2P52198 227 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 AP2S1P53680 142 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 SCAND1P57086 179 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 YPEL3P61236 119 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 DLK1P80370 383 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 Q5VSD8 79 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 AMTNQ6UX39 209 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 SLC35G3Q8N808 338 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 OR4B1Q8NGF8 309 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 OR6F1Q8NGZ6 308 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 RNF141Q8WVD5 230 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 NARS2Q96I59 477 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 C20orf173Q96LM9 149 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 TP53RKQ96S44 253 aa8.26□□□□□ -1.09
SPTLC1P3-201ENST00000403408 ZNF705GA8MUZ8 300 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 HBE1P02100 147 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 PI3P19957 117 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 AZU1P20160 251 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 BTF3P20290 206 aaKnown RBP8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 OR10J1P30954 320 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 TGFBR1P36897 503 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 TAS2R20P59543 309 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 RRN3P1Q2M238 152 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 FAM78BQ5VT40 261 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 OR1S2Q8NGQ3 325 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 Q8WTZ3 238 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 GPR146Q96CH1 333 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 LINC00052Q96N35 136 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 VCXQ9H320 206 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 DIABLOQ9NR28 239 aa8.25□□□□□ -1.09
SPTLC1P3-201ENST00000403408 A8MTW9 85 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 CORTO00230 105 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 CRXO43186 299 aaPredicted RBP8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 PSMB9P28065 219 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 HOXA1P49639 335 aaPredicted RBP8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 EIF2B2P49770 351 aaKnown RBP8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 RORCP51449 518 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 PSG9Q00887 426 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 Q6ZRN7 208 aaPredicted RBP8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 SSX7Q7RTT5 188 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 SPARTQ8N0X7 666 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 OR51G1Q8NGK1 321 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 UHRF2Q96PU4 802 aa8.24□□□□□ -1.09
SPTLC1P3-201ENST00000403408 Q9H8V8 135 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms