RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TIGITQ495A1 244 aa19.18■□□□□ 0.66
TSPAN4-207ENST00000397411 TOMM20LQ6UXN7 152 aa19.18■□□□□ 0.66
TSPAN4-207ENST00000397411 OR1S2Q8NGQ3 325 aa19.18■□□□□ 0.66
TSPAN4-207ENST00000397411 SLC35E1Q96K37 410 aa19.18■□□□□ 0.66
TSPAN4-207ENST00000397411 PSENENQ9NZ42 101 aa19.18■□□□□ 0.66
TSPAN4-207ENST00000397411 TRAV14DV4A0A0A6YYC5 116 aa19.17■□□□□ 0.66
TSPAN4-207ENST00000397411 SSSCA1O60232 199 aa19.17■□□□□ 0.66
TSPAN4-207ENST00000397411 OR10J1P30954 320 aa19.17■□□□□ 0.66
TSPAN4-207ENST00000397411 TMEM116Q8NCL8 245 aa19.17■□□□□ 0.66
TSPAN4-207ENST00000397411 LSM4Q9Y4Z0 139 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-207ENST00000397411 H3BP45 60 aa19.16■□□□□ 0.66
TSPAN4-207ENST00000397411 PRAF2O60831 178 aa19.16■□□□□ 0.66
TSPAN4-207ENST00000397411 LAMTOR1Q6IAA8 161 aa19.16■□□□□ 0.66
TSPAN4-207ENST00000397411 GSG1LQ6UXU4 331 aa19.16■□□□□ 0.66
TSPAN4-207ENST00000397411 Q8WTZ3 238 aa19.16■□□□□ 0.66
TSPAN4-207ENST00000397411 WDR89Q96FK6 387 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-207ENST00000397411 BMI1P35226 326 aa19.15■□□□□ 0.66
TSPAN4-207ENST00000397411 SMIM8Q96KF7 97 aa19.15■□□□□ 0.66
TSPAN4-207ENST00000397411 SMPXQ9UHP9 88 aa19.15■□□□□ 0.66
TSPAN4-207ENST00000397411 IGHV3-49A0A0A0MS15 119 aa19.14■□□□□ 0.65
TSPAN4-207ENST00000397411 IGHV7-4-1A0A0J9YVY3 117 aa19.14■□□□□ 0.65
TSPAN4-207ENST00000397411 SCAF4O95104 1147 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-207ENST00000397411 IGLC1P0CG04 106 aa19.14■□□□□ 0.65
TSPAN4-207ENST00000397411 C2orf50Q96LR7 162 aa19.14■□□□□ 0.65
TSPAN4-207ENST00000397411 RAB40CQ96S21 281 aa19.14■□□□□ 0.65
TSPAN4-207ENST00000397411 TRAV25A0A0B4J276 109 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 ZNF785A8K8V0 405 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 SNRPGP15A8MWD9 76 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 L7N2F9 121 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 IGKV1-17P01599 117 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 VAMP2P63027 116 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 TMEM61Q8N0U2 210 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 MARVELD1Q9BSK0 173 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 RHPN1-AS1Q9BWJ2 59 aa19.13■□□□□ 0.65
TSPAN4-207ENST00000397411 DNAH3Q8TD57 4116 aa19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 ZFP92A6NM28 416 aa19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 MBPP02686 304 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 NPPCP23582 126 aa19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 YPEL3P61236 119 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 GAMTQ14353 236 aa19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 NARS2Q96I59 477 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 LSM5Q9Y4Y9 91 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-207ENST00000397411 IGHV3OR16-13A0A075B7E8 117 aa19.11■□□□□ 0.65
TSPAN4-207ENST00000397411 IGHV3-74A0A0B4J1X5 117 aa19.11■□□□□ 0.65
TSPAN4-207ENST00000397411 RD3LP0DJH9 198 aa19.11■□□□□ 0.65
TSPAN4-207ENST00000397411 CD81P60033 236 aa19.11■□□□□ 0.65
TSPAN4-207ENST00000397411 ZNF414Q96IQ9 312 aa19.11■□□□□ 0.65
TSPAN4-207ENST00000397411 METTL26Q96S19 204 aa19.11■□□□□ 0.65
TSPAN4-207ENST00000397411 RCL1Q9Y2P8 373 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-207ENST00000397411 CHEK1O14757 476 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 FABP1P07148 127 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 OR8G2PQ6IF36 304 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 Q8N1Y9 231 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 B9D2Q9BPU9 175 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 NEURL2Q9BR09 285 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 TMEM231Q9H6L2 316 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 TUBA4BQ9H853 241 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 ZFAND3Q9H8U3 227 aa19.1■□□□□ 0.65
TSPAN4-207ENST00000397411 GOSR2O14653 212 aa19.09■□□□□ 0.65
TSPAN4-207ENST00000397411 TAS2R30P59541 319 aa19.09■□□□□ 0.65
TSPAN4-207ENST00000397411 A0A1W2PS18 150 aa19.08■□□□□ 0.64
TSPAN4-207ENST00000397411 SSNA1O43805 119 aa19.08■□□□□ 0.64
TSPAN4-207ENST00000397411 PVALBP20472 110 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-207ENST00000397411 BCAP31P51572 246 aa19.08■□□□□ 0.64
TSPAN4-207ENST00000397411 PAX9P55771 341 aa19.08■□□□□ 0.64
TSPAN4-207ENST00000397411 S100A10P60903 97 aa19.08■□□□□ 0.64
TSPAN4-207ENST00000397411 RNF2Q99496 336 aa19.08■□□□□ 0.64
TSPAN4-207ENST00000397411 IGHV3-66A0A0C4DH42 116 aa19.07■□□□□ 0.64
TSPAN4-207ENST00000397411 SMCO3A2RU48 225 aa19.07■□□□□ 0.64
TSPAN4-207ENST00000397411 TSC22D2O75157 780 aa19.07■□□□□ 0.64
TSPAN4-207ENST00000397411 TOMM40O96008 361 aa19.07■□□□□ 0.64
TSPAN4-207ENST00000397411 METTL15P1P0C7V9 234 aa19.07■□□□□ 0.64
TSPAN4-207ENST00000397411 AKR1C1Q04828 323 aa19.07■□□□□ 0.64
TSPAN4-207ENST00000397411 K7EPK0 472 aa19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 IL4P05112 153 aa19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 CD7P09564 240 aa19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 PSG1P11464 419 aa19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 RPL11P62913 178 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 OR10P1Q8NGE3 313 aa19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 ST8SIA2Q92186 375 aa19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 GRAMD2BQ96HH9 432 aa19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 SPAG8Q99932 426 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-207ENST00000397411 IGKV3-7A0A075B6H7 116 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 C7orf66A4D0T2 115 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 TSPAN4O14817 238 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 SIX6O95475 246 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 PTTG1O95997 202 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 APOHP02749 345 aaPredicted RBP19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 CD5P06127 495 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 IGHV4-30-4P0DP06 118 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 TCF24Q7RTU0 167 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 OR51G1Q8NGK1 321 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 ASCL2Q99929 193 aa19.05■□□□□ 0.64
TSPAN4-207ENST00000397411 FRMD6-AS1P0C7T7 363 aa19.04■□□□□ 0.64
TSPAN4-207ENST00000397411 PAFAH1B2P68402 229 aa19.04■□□□□ 0.64
TSPAN4-207ENST00000397411 TMEM14EPQ6UXP3 125 aa19.04■□□□□ 0.64
TSPAN4-207ENST00000397411 ACOT7LQ6ZUV0 252 aa19.04■□□□□ 0.64
TSPAN4-207ENST00000397411 OR4C46A6NHA9 309 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 OR11H12B2RN74 326 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 PRSS46E5RG02 174 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms