RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 STX12Q86Y82 276 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 CROCCP3Q8IVE0 287 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 CMTM1Q8IZ96 169 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 OR4A16Q8NH70 328 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 NARS2Q96I59 477 aaKnown RBP6.66□□□□□ -1.34
NEDD9-203ENST00000397378 SEC22AQ96IW7 307 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 NIPSNAP3BQ9BS92 247 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 PTTG2Q9NZH5 202 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 EXTL2Q9UBQ6 330 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 CBY1Q9Y3M2 126 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 U3KQE9 123 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 FAT1Q14517 4588 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 CORTO00230 105 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 GPR31O00270 319 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 SMR3BP02814 79 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-203ENST00000397378 S100A9P06702 114 aaKnown RBP6.65□□□□□ -1.34
NEDD9-203ENST00000397378 AP2S1P53680 142 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-203ENST00000397378 XGP55808 180 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 DHRS2Q13268 280 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 SFXN4Q6P4A7 337 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 Q6ZSN1 163 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 H2BFWTQ7Z2G1 175 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 AKAP14Q86UN6 197 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 SLC25A38Q96DW6 304 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 C17orf77Q96MU5 243 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 ATG101Q9BSB4 218 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 YTHDF1Q9BYJ9 559 aaKnown RBP6.65□□□□□ -1.34
NEDD9-203ENST00000397378 AUNIPQ9H7T9 357 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 EHFQ9NZC4 300 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 RFNGQ9Y644 331 aa6.65□□□□□ -1.34
NEDD9-203ENST00000397378 A0A1B0GVG6 124 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 FAM90A26D6RGX4 464 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 CLN5O75503 358 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 FCER2P06734 321 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 HLA-DRB4P13762 266 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 SNCAP37840 140 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 PPP5CP53041 499 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 EMP1P54849 157 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 SNRPD3P62318 126 aaKnown RBP6.64□□□□□ -1.35
NEDD9-203ENST00000397378 RGS21Q2M5E4 152 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 FAM222AQ5U5X8 452 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 C15orf53Q8NAA6 179 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 GLMPQ8WWB7 406 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 TMEM230Q96A57 120 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 ZNF2Q9BSG1 426 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-203ENST00000397378 TXNL4BQ9NX01 149 aaKnown RBP6.64□□□□□ -1.35
NEDD9-203ENST00000397378 HLA-DRB4X5D2U9 266 aa6.64□□□□□ -1.35
NEDD9-203ENST00000397378 SCGB2A1O75556 95 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 IGKV1-39P01597 117 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 IGKV1-17P01599 117 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 IGKV1D-39P04432 117 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 HTN3P15516 51 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 RFX2P48378 723 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 HOXA1P49639 335 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-203ENST00000397378 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 OR5H6Q8NGV6 325 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 OR4X1Q8NH49 305 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 FXYD6Q9H0Q3 95 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 FNDC4Q9H6D8 234 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-203ENST00000397378 DIABLOQ9NR28 239 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
NEDD9-203ENST00000397378 ANAPC10Q9UM13 185 aa6.63□□□□□ -1.35
NEDD9-203ENST00000397378 HMCN2Q8NDA2 5059 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 TRAV30A0A087WSZ9 112 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 MEIS3P1A6NDR6 274 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 RNASE2P10153 161 aaKnown RBP6.62□□□□□ -1.35
NEDD9-203ENST00000397378 S100GP29377 79 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 NKX2-1P43699 371 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-203ENST00000397378 RPL5P46777 297 aaKnown RBP6.62□□□□□ -1.35
NEDD9-203ENST00000397378 SUB1P53999 127 aaKnown RBP eCLIP6.62□□□□□ -1.35
NEDD9-203ENST00000397378 AQP4P55087 323 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 TAS2R46P59540 309 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 OR6F1Q8NGZ6 308 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 ZNRF2Q8NHG8 242 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 IFT46Q9NQC8 304 aa6.62□□□□□ -1.35
NEDD9-203ENST00000397378 IGHV3OR16-12A0A075B7B8 117 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-203ENST00000397378 J3KRW8 73 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 OPRK1P41145 380 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 ALDH3B2P48448 385 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 DLK1P80370 383 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 PHLDA2Q53GA4 152 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 SPINK9Q5DT21 86 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 LPCAT3Q6P1A2 487 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 TBC1D26Q86UD7 250 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 SLC35G3Q8N808 338 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 OR5H2Q8NGV7 314 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 MRGPRFQ96AM1 343 aa6.61□□□□□ -1.35
NEDD9-203ENST00000397378 YTHDF2Q9Y5A9 579 aaKnown RBP6.61□□□□□ -1.35
NEDD9-203ENST00000397378 LOC102723971A0A1B0GUV8 181 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms