RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 TRAV3A0A0B4J244 114 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 FAM236DA0A1B0GTK5 79 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 ZNF736B4DX44 427 aaPredicted RBP0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 KPNA3O00505 521 aaPredicted RBP0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 NIPSNAP2O75323 286 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR4E1P0C645 316 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 FAM236CP0DP71 79 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 CASP1P29466 404 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 TSNQ15631 228 aaKnown RBP0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 MPV17LQ2QL34 196 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 IAH1Q2TAA2 248 aaPredicted RBP0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 C12orf74Q32Q52 190 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 BRMS1LQ5PSV4 323 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 SOSTDC1Q6X4U4 206 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRAPPC5Q8IUR0 188 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR52R1Q8NGF1 315 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR2T10Q8NGZ9 312 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 TEX47Q8TBZ9 253 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 CT55Q8WUE5 264 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 BORCS7Q96B45 105 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 ARL5BQ96KC2 179 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 C2orf50Q96LR7 162 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 AMELYQ99218 206 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 HIST1H2BLQ99880 126 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 PARD6GQ9BYG4 376 aaPredicted RBP0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 C14orf132Q9NPU4 83 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 CDC42SE1Q9NRR8 79 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 V9GYY5 206 aaPredicted RBP0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 KIF1BO60333 1816 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 MYO3BQ8WXR4 1341 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 EML6Q6ZMW3 1958 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 PLB1Q6P1J6 1458 aa0.28□□□□□ -2.37
RNU6-440P-201ENST00000390882 KMT2BQ9UMN6 2715 aaPredicted RBP0.28□□□□□ -2.37
RNU6-440P-201ENST00000390882 ALPK2Q86TB3 2170 aa0.28□□□□□ -2.37
RNU6-440P-201ENST00000390882 RIMBP3CA6NJZ7 1639 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 RIMBP3BA6NNM3 1639 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 RIMBP3Q9UFD9 1639 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 ZNF106Q9H2Y7 1883 aaKnown RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 PLXND1Q9Y4D7 1925 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 hCG_1818297A0A087WSY0 165 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 hADV38S2A0JD32 116 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 CCDC160A6NGH7 325 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 A8MT66 165 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 CLDN25C9JDP6 229 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 J3QRK9 145 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 RPP14O95059 124 aaKnown RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 LYPLA2O95372 231 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 CNIH1O95406 144 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 ZNF682O95780 498 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 PPIBP23284 216 aaKnown RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 ANP32AP39687 249 aaKnown RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 AP3S2P59780 193 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 EDDM3AQ14507 147 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 ESRGQ1W209 222 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 DEFB113Q30KQ7 82 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 TEX261Q6UWH6 196 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 OTUD6BQ8N6M0 293 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 BORCS5Q969J3 196 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 TRIM4Q9C037 500 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 C6orf62Q9GZU0 229 aaPredicted RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 RNF122Q9H9V4 155 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 PARVGQ9HBI0 331 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 ACER3Q9NUN7 267 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 U3KQ87 197 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 ADCY9O60503 1353 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 KDM6AO15550 1401 aaPredicted RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 TNS3Q68CZ2 1445 aa0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 COL1A1P02452 1464 aaPredicted RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 ARHGEF28Q8N1W1 1705 aaKnown RBP0.27□□□□□ -2.37
RNU6-440P-201ENST00000390882 MDN1Q9NU22 5596 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 SMIM9A6NGZ8 99 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 C1orf196B1AJZ1 125 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 NCR3O14931 201 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 CYB5BO43169 146 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 SERPINE1P05121 402 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 C8GP07360 202 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 RPS17P08708 135 aaKnown RBP0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 ZNF25P17030 456 aaPredicted RBP0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 CNBPP62633 177 aaKnown RBP0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 RHOBP62745 196 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 RANP62826 216 aaKnown RBP0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 HIST1H3AP68431 136 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 H3F3AP84243 136 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 SPRNQ5BIV9 151 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 FAM74A1Q5RGS3 127 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 LCA10Q71F78 164 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 C12orf45Q8N5I9 185 aaPredicted RBP0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 Q8N6K4 173 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 OR8J2Q8NGG1 315 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 OR51A2Q8NGJ7 313 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 OR8D4Q8NGM9 314 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 TMEM254Q8TBM7 123 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 WFDC5Q8TCV5 224 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 FAM172AQ8WUF8 416 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 PATE1Q8WXA2 126 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 ADAT3Q96EY9 351 aaPredicted RBP0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 LINC00467Q9BRT7 94 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 BCL2L10Q9HD36 194 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 UBAP1Q9NZ09 502 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms