RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 IGKV1OR2-108A0A075B7D4 117 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 A0A087WWC5 75 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 IGHV7-81A0A0B4J1V7 117 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 H3BUX3 64 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 J3QLI3 93 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 CEBPGP53567 150 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 ATP5IP56385 69 aaPredicted RBP9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 GCSAMLQ5JQS6 135 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 FFAR4Q5NUL3 377 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 SSX7Q7RTT5 188 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 ZNF709Q8N972 641 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 OR5R1Q8NH85 324 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 ARPC1AQ92747 370 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 ACY3Q96HD9 319 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 SLC25A33Q9BSK2 321 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 C1RLQ9NZP8 487 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 LSM4Q9Y4Z0 139 aaKnown RBP9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 TIMM9Q9Y5J7 89 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 M0R036 132 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 FGF8P55075 233 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 SERF2P84101 59 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 ASPHD1Q5U4P2 390 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 CYB5R2Q6BCY4 276 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 LCN15Q6UWW0 184 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 CENPVQ7Z7K6 275 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 ARL6IP6Q8N6S5 226 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 NOL4LQ96MY1 436 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 RASL11BQ9BPW5 248 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 GGTLC1Q9BX51 225 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 WNT10AQ9GZT5 417 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 F11RQ9Y624 299 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 EGR2P11161 476 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 MRPL41Q8IXM3 137 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 FAM24BQ8N5W8 94 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 ZNF114Q8NC26 417 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 OR1P1Q8NH06 330 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 SLC35B3Q9H1N7 401 aa9.64□□□□□ -0.87
SPTBN1-203ENST00000389980 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 HMGB3O15347 200 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 HLA-DRB1P01911 266 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 DEFB112Q30KQ8 113 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 TMEM41BQ5BJD5 291 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 RPP25LQ8N5L8 163 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 CBY1Q9Y3M2 126 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 BTBD17A6NE02 478 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 MPDU1O75352 247 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 OR2C1O95371 312 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 GATA2P23769 480 aaPredicted RBP9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 C5orf56Q8N8D9 126 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 NPIPB3Q92617 1050 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 RCC1LQ96I51 464 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 SLC35E1Q96K37 410 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
SPTBN1-203ENST00000389980 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 YIF1AO95070 293 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 AMY1AP04745 511 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 OR10J1P30954 320 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 PVRIGQ6DKI7 326 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 OR5T1Q8NG75 326 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 OR10G4Q8NGN3 311 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 OR10G9Q8NGN4 311 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 OR10G7Q8NGN6 311 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 CACNG8Q8WXS5 425 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 SLC25A22Q9H936 323 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 DOK5Q9P104 306 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
SPTBN1-203ENST00000389980 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 FNDC10F2Z333 226 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 ATP6V0E1O15342 81 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 MT-CO2P00403 227 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 RND2P52198 227 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 IL17RELQ6ZVW7 336 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 STPG3Q8N7X2 389 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 FOXC2Q99958 501 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 TNFRSF19Q9NS68 423 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 MOB4Q9Y3A3 225 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 S4R3C0 116 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 OTOGQ6ZRI0 2925 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 ANK3Q12955 4377 aaKnown RBP9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 TCAPO15273 167 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 IGHV4-59P01825 116 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 ICAM4Q14773 271 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 ECSCRQ19T08 205 aa9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 GSX1Q9H4S2 264 aaPredicted RBP9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 PUS1Q9Y606 427 aaKnown RBP eCLIP9.61□□□□□ -0.87
SPTBN1-203ENST00000389980 A6NDX4 124 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 ZFP92A6NM28 416 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 FSHBP01225 129 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 RPS10P46783 165 aaKnown RBP9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 NDUFA6P56556 154 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 ZNF90Q03938 601 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms