RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CDC42P60953 191 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 CXCR4P61073 352 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 RUNX1Q01196 453 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF829Q3KNS6 432 aaPredicted RBP3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 SPIN3Q5JUX0 258 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 BCL2L15Q5TBC7 163 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 DEFB107AQ8IZN7 70 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 VKORC1L1Q8N0U8 176 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 ARRDC1Q8N5I2 433 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR4D6Q8NGJ1 314 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR51T1Q8NGJ9 327 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR10AC1Q8NH08 325 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 UBALD1Q8TB05 177 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 ASB17Q8WXJ9 295 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 BORCS8Q96FH0 119 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 KCTD7Q96MP8 289 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 VCXQ9H320 206 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 GAL3ST2Q9H3Q3 398 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 REEP1Q9H902 201 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 EXOSC4Q9NPD3 245 aaKnown RBP3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZC4H2Q9NQZ6 224 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 TVP23BQ9NYZ1 205 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 DYNC1H1Q14204 4646 aaKnown RBP3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 DNAH17Q9UFH2 4485 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 IGLV1-50A0A075B6I6 118 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 A0A1W2PQL4 384 aaPredicted RBP3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 ATF1P18846 271 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 CNTFRP26992 372 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 RBP2P50120 134 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 GNG10P50151 68 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 DAPP51397 102 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 INSL3P51460 131 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 SLC35B1P78383 322 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF616Q08AN1 781 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF816Q0VGE8 651 aaPredicted RBP3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 LTC4SQ16873 150 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 Q8IYB0 196 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF439Q8NDP4 499 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR11H7Q8NGC8 314 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR51A4Q8NGJ6 313 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR5D18Q8NGL1 313 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 HAVCR2Q8TDQ0 301 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 CASTOR1Q8WTX7 329 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 CANT1Q8WVQ1 401 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF414Q96IQ9 312 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 UBE2E2Q96LR5 201 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 TBX5Q99593 518 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 TIMM17AQ99595 171 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 IDI2-AS1Q9NZ38 188 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 TMEM14AQ9Y6G1 99 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
RNU4-39P-201ENST00000362455 MEIKINA0A087WXM9 373 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 LOC107986453A0A1B0GWG9 222 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 METTL15A6NJ78 407 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 OVOL1O14753 267 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 DEGS1O15121 323 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 SRMP19623 302 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 POLR2IP36954 125 aaKnown RBP3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 PTGES3Q15185 160 aaKnown RBP3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 GCSAMLQ5JQS6 135 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 FAM27D1Q5T7N8 215 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 FAHD1Q6P587 224 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 LINC00322Q6ZN03 302 aaPredicted RBP3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 SAXO1Q8IYX7 474 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 YIPF7Q8N8F6 280 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 RTN4IP1Q8WWV3 396 aaPredicted RBP3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 RGP1Q92546 391 aaPredicted RBP3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 ISOC1Q96CN7 298 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 UQCC2Q9BRT2 126 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 TOLLIPQ9H0E2 274 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 MCUBQ9NWR8 336 aa3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 CHTOPQ9Y3Y2 248 aaKnown RBP3.44□□□□□ -1.86
RNU4-39P-201ENST00000362455 IGHV3-43A0A0B4J1X8 118 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 FUOMA2VDF0 154 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR4C45A6NMZ5 311 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF670-ZNF695F2Z2N8 137 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 H0YJX3 145 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 J3QRE1 110 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 MPZL2O60487 215 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 HSBP1O75506 76 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 GATBO75879 557 aaKnown RBP3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 CYB5AP00167 134 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 IGLV1-51P01701 117 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 PRKACBP22694 351 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 DTYMKP23919 212 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF137PP52743 207 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 SYNJ2BPP57105 145 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 SYCNQ0VAF6 134 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 SLAQ13239 276 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 PIGYQ3MUY2 71 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 NXNL2Q5VZ03 156 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 C12orf73Q69YU5 71 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 ELP2Q6IA86 826 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 ASCL4Q6XD76 172 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 DHFR2Q86XF0 187 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 LINC00311Q8N616 119 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF565Q8N9K5 539 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR13C9Q8NGT0 318 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms