RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RBPJQ06330 500 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 RPL39P5Q59GN2 51 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 PRR31Q5SQ13 230 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 C10orf128Q5T292 105 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 DNM1P46Q6ZS02 220 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 COX7A1P24310 79 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 CACNG8Q8WXS5 425 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 CTHRC1Q96CG8 243 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 CHAC1Q9BUX1 264 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 hCG_38984A0A1B0GV85 526 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 A0A1W2PQM1 296 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 COA6Q5JTJ3 125 aaKnown RBP5.11□□□□□ -1.59
VPS13B-203ENST00000358544 OR9G9P0C7N8 305 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 CX3CL1P78423 397 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 FAM157AC9JC47 383 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 PPBPP02775 128 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 PRDX2P32119 198 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 RPL15P61313 204 aaKnown RBP5.1□□□□□ -1.59
VPS13B-203ENST00000358544 NUP37Q8NFH4 326 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 FGF11Q92914 225 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV4-34P06331 123 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 CFPP27918 469 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 LHX2P50458 406 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 FBXW9Q5XUX1 488 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM171Q8WVE6 324 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 SARAFQ96BY9 339 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 RAB1BQ9H0U4 201 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 SMAD7O15105 426 aaKnown RBP5.1□□□□□ -1.59
VPS13B-203ENST00000358544 ABHD12Q8N2K0 398 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 RASL10BQ96S79 203 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 CLEC7AQ9BXN2 247 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 GLI3P10071 1580 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV1OR21-1A0A087WYE8 117 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 ZNF815PA8K554 130 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 MOSP00540 346 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 CXCL10P02778 98 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 LHFPL4Q7Z7J7 247 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 ZDHHC16Q969W1 377 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 LAMTOR5O43504 91 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 WDR83OSQ9Y284 106 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 BOD1L2Q8IYS8 172 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 C12orf77C9JDV5 145 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 PMVKQ15126 192 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 CXCL12P48061 93 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 ECSCRQ19T08 205 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 RPP25LQ8N5L8 163 aaKnown RBP5.1□□□□□ -1.59
VPS13B-203ENST00000358544 KIR3DL3Q8N743 410 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 GGTLC1Q9BX51 225 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 INO80CQ6PI98 192 aaPredicted RBP5.1□□□□□ -1.59
VPS13B-203ENST00000358544 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.1□□□□□ -1.59
VPS13B-203ENST00000358544 Q9H3A6 140 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 CELA3AP09093 270 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 ZNF714Q96N38 554 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 LOXL2Q9Y4K0 774 aa5.1□□□□□ -1.59
VPS13B-203ENST00000358544 A0A1W2PQF6 199 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 ID1P41134 155 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 TRGV5A0A0B4J1U4 118 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 VEGFBP49765 207 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 TNFAIP6P98066 277 aaPredicted RBP5.09□□□□□ -1.59
VPS13B-203ENST00000358544 Q8NFD4 153 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 C18orf32Q8TCD1 76 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 CSTL1Q9H114 145 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 NLRC5Q86WI3 1866 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 F8W1H4 67 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 RAMP3O60896 148 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 TIAF1O95411 115 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 CRISPLD2Q9H0B8 497 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.09□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM170BQ5T4T1 132 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 LINC00305Q7Z4B0 112 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 KIR2DL4Q99706 377 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 EPDR1Q9UM22 224 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 KLF12Q9Y4X4 402 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 LOXL3P58215 753 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 ADAMTS7Q9UKP4 1686 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 REG1AP05451 166 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 STPG1Q5TH74 334 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 REG1BP48304 166 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM78Q5T7P6 136 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 PILRBQ9UKJ0 227 aa5.09□□□□□ -1.59
VPS13B-203ENST00000358544 TNFRSF6BO95407 300 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 GHRHP01286 108 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 FER1L6-AS2Q96M78 137 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 ZSWIM8A7E2V4 1837 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 PRSS57Q6UWY2 283 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 SP7Q8TDD2 431 aaPredicted RBP5.09□□□□□ -1.6
VPS13B-203ENST00000358544 C1QTNF5Q9BXJ0 243 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 MPV17P39210 176 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 JPT1Q9UK76 154 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 MOB4Q9Y3A3 225 aa5.09□□□□□ -1.6
VPS13B-203ENST00000358544 FOXI3A8MTJ6 420 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-203ENST00000358544 YPEL3P61236 119 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-203ENST00000358544 GATA2P23769 480 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-203ENST00000358544 PLNP26678 52 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 NUP35Q8NFH5 326 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 SYT8Q8NBV8 401 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 LYZL4Q96KX0 146 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 SRXN1Q9BYN0 137 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms