RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PAFAH1B2P68402 229 aa11.41□□□□□ -0.58
DDX55-202ENST00000354291 TNP2Q05952 138 aa11.41□□□□□ -0.58
DDX55-202ENST00000354291 SPCS2Q15005 226 aa11.41□□□□□ -0.58
DDX55-202ENST00000354291 SURF2Q15527 256 aaPredicted RBP11.41□□□□□ -0.58
DDX55-202ENST00000354291 RNASE11Q8TAA1 199 aaKnown RBP11.41□□□□□ -0.58
DDX55-202ENST00000354291 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
DDX55-202ENST00000354291 CELA1Q9UNI1 258 aa11.41□□□□□ -0.58
DDX55-202ENST00000354291 C14orf166Q9Y224 244 aaKnown RBP11.41□□□□□ -0.58
DDX55-202ENST00000354291 TEX13DA0A0J9YY54 714 aaPredicted RBP11.4□□□□□ -0.58
DDX55-202ENST00000354291 CDS2O95674 445 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 TMEM50AO95807 157 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 HOXA1P49639 335 aaPredicted RBP11.4□□□□□ -0.58
DDX55-202ENST00000354291 DEFB131AP59861 70 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 TOMM20LQ6UXN7 152 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 ZNF600Q6ZNG1 722 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 STHQ8IWL8 128 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 RAB2BQ8WUD1 216 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 SMIM4Q8WVI0 70 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 DIRAS2Q96HU8 199 aa11.4□□□□□ -0.58
DDX55-202ENST00000354291 SRRM2Q9UQ35 2752 aaKnown RBP11.39□□□□□ -0.59
DDX55-202ENST00000354291 IGHV3OR16-13A0A075B7E8 117 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 IGHV3-74A0A0B4J1X5 117 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 CTDSPLO15194 276 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 SCGB2A1O75556 95 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 GIG44P09565 113 aaPredicted RBP11.39□□□□□ -0.59
DDX55-202ENST00000354291 AKAIN1P0CW23 69 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
DDX55-202ENST00000354291 RPL5P46777 297 aaKnown RBP11.39□□□□□ -0.59
DDX55-202ENST00000354291 SPCS3P61009 180 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 DHODHQ02127 395 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 IL18Q14116 193 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 FAM90A2PQ658T7 463 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 CLVS1Q8IUQ0 354 aaPredicted RBP11.39□□□□□ -0.59
DDX55-202ENST00000354291 OR52E5Q8NH55 327 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 GLYATL2Q8WU03 294 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 BCL7BQ9BQE9 202 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 RTBDNQ9BSG5 229 aaPredicted RBP11.39□□□□□ -0.59
DDX55-202ENST00000354291 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
DDX55-202ENST00000354291 X6R8D5 127 aa11.39□□□□□ -0.59
DDX55-202ENST00000354291 A0A0G2JRQ6 117 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
DDX55-202ENST00000354291 OR5AC1P0C628 307 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 NPY1RP25929 384 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 TMBIM6P55061 237 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 AARDQ4LEZ3 155 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 FAAP20Q6NZ36 180 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 RBPMSQ93062 196 aaKnown RBP11.38□□□□□ -0.59
DDX55-202ENST00000354291 PRRT1Q99946 306 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 VSIRQ9H7M9 311 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 CLEC5AQ9NY25 188 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 CCDC59Q9P031 241 aaKnown RBP11.38□□□□□ -0.59
DDX55-202ENST00000354291 GPR132Q9UNW8 380 aa11.38□□□□□ -0.59
DDX55-202ENST00000354291 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDX55-202ENST00000354291 ZNF705EA8MWA4 302 aaPredicted RBP11.37□□□□□ -0.59
DDX55-202ENST00000354291 CLN5O75503 358 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 NPPCP23582 126 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 OPRK1P41145 380 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 HTR2BP41595 481 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 OR4X1Q8NH49 305 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 DYNC2LI1Q8TCX1 351 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 TMEM231Q9H6L2 316 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 NAA60Q9H7X0 242 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 CACFD1Q9UGQ2 172 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 TBC1D24Q9ULP9 559 aa11.37□□□□□ -0.59
DDX55-202ENST00000354291 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 A0A1W2PS18 150 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 CRYM-AS1A6NIL9 109 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 RPL11P62913 178 aaKnown RBP11.36□□□□□ -0.59
DDX55-202ENST00000354291 SELENOHQ8IZQ5 122 aaKnown RBP11.36□□□□□ -0.59
DDX55-202ENST00000354291 OR4C16Q8NGL9 310 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 SCGB3A2Q96PL1 93 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 FNDC4Q9H6D8 234 aaPredicted RBP11.36□□□□□ -0.59
DDX55-202ENST00000354291 ZFAND3Q9H8U3 227 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 RSL24D1Q9UHA3 163 aaKnown RBP11.36□□□□□ -0.59
DDX55-202ENST00000354291 KCNIP3Q9Y2W7 256 aa11.36□□□□□ -0.59
DDX55-202ENST00000354291 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 A0A1B0GU03 582 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 RPS10-NUDT3A0A1W2PQS6 291 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 GSTZ1O43708 216 aaPredicted RBP11.35□□□□□ -0.59
DDX55-202ENST00000354291 DFFBO76075 338 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
DDX55-202ENST00000354291 MLANAQ16655 118 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 TMEM268Q5VZI3 342 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 OR51S1Q8NGJ8 323 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 LHFPL5Q8TAF8 219 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 HEYLQ9NQ87 328 aaPredicted RBP11.35□□□□□ -0.59
DDX55-202ENST00000354291 SCP2D1Q9UJQ7 156 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 AGRNO00468 2067 aa11.35□□□□□ -0.59
DDX55-202ENST00000354291 ANKRD20A5PA0PJZ0 165 aa11.34□□□□□ -0.59
DDX55-202ENST00000354291 NOL3O60936 208 aaKnown RBP11.34□□□□□ -0.59
DDX55-202ENST00000354291 C2orf83Q53S99 150 aa11.34□□□□□ -0.59
DDX55-202ENST00000354291 LILRB2Q8N423 598 aa11.34□□□□□ -0.59
DDX55-202ENST00000354291 FAM24BQ8N5W8 94 aa11.34□□□□□ -0.59
DDX55-202ENST00000354291 IL22RA2Q969J5 263 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms