RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 HYPMO75409 117 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 TMEM241Q24JQ0 296 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 OR8I2Q8N0Y5 310 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 C11orf44Q8N8P7 122 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 TBX15Q96SF7 602 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 MRPL36Q9P0J6 103 aaKnown RBP8.87□□□□□ -0.99
SVIP-201ENST00000354193 B4DSR2 109 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 CXorf1O96002 111 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 SRP19P09132 144 aaKnown RBP8.87□□□□□ -0.99
SVIP-201ENST00000354193 COMPP49747 757 aaPredicted RBP8.87□□□□□ -0.99
SVIP-201ENST00000354193 PAXXQ9BUH6 204 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 DERL1Q9BUN8 251 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 TRAV34A0A0B4J273 112 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 TNFRSF13BO14836 293 aaPredicted RBP8.87□□□□□ -0.99
SVIP-201ENST00000354193 S100PP25815 95 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 RPL35P42766 123 aaKnown RBP8.87□□□□□ -0.99
SVIP-201ENST00000354193 TCL1AP56279 114 aa8.87□□□□□ -0.99
SVIP-201ENST00000354193 FAM90A9PA6NNJ1 464 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 GCHFRP30047 84 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 SLC35B1P78383 322 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 Q71RC1 249 aaPredicted RBP8.86□□□□□ -0.99
SVIP-201ENST00000354193 C10orf105Q8TEF2 133 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 PARLQ9H300 379 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 C2orf83Q53S99 150 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 TMEM68Q96MH6 324 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 MT-ND4LP03901 98 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 UBE2E1P51965 193 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 UBE2G1P62253 170 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 PDZD11Q5EBL8 140 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 PIP4P2Q8N4L2 257 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 NOL4LQ96MY1 436 aaPredicted RBP8.86□□□□□ -0.99
SVIP-201ENST00000354193 CELSR1Q9NYQ6 3014 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 CENPVL3A0A0U1RRI6 287 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 PMS2P5A8MQ11 134 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 C1orf196B1AJZ1 125 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 BSXQ3C1V8 233 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 ASPHD1Q5U4P2 390 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 CLEC19AQ6UXS0 136 aa8.86□□□□□ -0.99
SVIP-201ENST00000354193 SCGB2A1O75556 95 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 CD5P06127 495 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 C8orf88P0DMB2 117 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 OR1L4Q8NGR5 311 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 OR4A5Q8NH83 315 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 Q8WTZ3 238 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 CGB1A6NKQ9 187 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 F6UZH7 168 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 IGLV2-23P01705 113 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 PSG1P11464 419 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 ERVFC1-1P60608 527 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 MALSU1Q96EH3 234 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 ASCL2Q99929 193 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 LINC00574Q9H8X3 128 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 TIMM9Q9Y5J7 89 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 CSMD1Q96PZ7 3565 aa8.85□□□□□ -0.99
SVIP-201ENST00000354193 IGLC7A0M8Q6 106 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 PGPA6NDG6 321 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 RHOGP84095 191 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 POU2AF1Q16633 256 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 C21orf62Q9NYP8 219 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 ZNF785A8K8V0 405 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 J3KRW8 73 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 ATP6V0E1O15342 81 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 TRGV3P03979 118 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 RNF212Q495C1 297 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 EIF4E3Q8N5X7 224 aaKnown RBP8.84□□□□□ -0.99
SVIP-201ENST00000354193 PFDN5Q99471 154 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 FUT9Q9Y231 359 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 HIGD1AQ9Y241 93 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 TIMM8BQ9Y5J9 83 aaPredicted RBP8.84□□□□□ -0.99
SVIP-201ENST00000354193 AMY1AP04745 511 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 MFAP4P55083 255 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 TPPP2P59282 170 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 HABP2Q14520 560 aaPredicted RBP8.84□□□□□ -0.99
SVIP-201ENST00000354193 GGACTQ9BVM4 153 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 BEX4Q9NWD9 120 aaPredicted RBP8.84□□□□□ -0.99
SVIP-201ENST00000354193 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -0.99
SVIP-201ENST00000354193 LINC01548A6NM66 108 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 C15orf32Q32M92 178 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 TMEM95Q3KNT9 176 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 ZNF506Q5JVG8 444 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 OR11H6Q8NGC7 330 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
SVIP-201ENST00000354193 IGHV1-69DA0A0B4J2H0 117 aa8.83□□□□□ -1
SVIP-201ENST00000354193 IGHV1-69P01742 117 aa8.83□□□□□ -1
SVIP-201ENST00000354193 FAM3BP58499 235 aaPredicted RBP8.83□□□□□ -1
SVIP-201ENST00000354193 NDPQ00604 133 aa8.83□□□□□ -1
SVIP-201ENST00000354193 FBLN7Q53RD9 439 aa8.83□□□□□ -1
SVIP-201ENST00000354193 DPPA3Q6W0C5 159 aa8.83□□□□□ -1
SVIP-201ENST00000354193 OR1P1Q8NH06 330 aa8.83□□□□□ -1
SVIP-201ENST00000354193 RNASEH2CQ8TDP1 164 aaKnown RBP8.83□□□□□ -1
SVIP-201ENST00000354193 CACNG8Q8WXS5 425 aa8.83□□□□□ -1
SVIP-201ENST00000354193 UNC79Q9P2D8 2635 aa8.83□□□□□ -1
SVIP-201ENST00000354193 FABP1P07148 127 aa8.83□□□□□ -1
SVIP-201ENST00000354193 RAB5BP61020 215 aa8.83□□□□□ -1
SVIP-201ENST00000354193 GNG5P63218 68 aa8.83□□□□□ -1
SVIP-201ENST00000354193 FLI1Q01543 452 aaPredicted RBP8.83□□□□□ -1
SVIP-201ENST00000354193 MINOS1Q5TGZ0 78 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms