RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 DLK1P80370 383 aa11.41□□□□□ -0.58
NECTIN1-202ENST00000340882 SIGLEC15Q6ZMC9 328 aa11.41□□□□□ -0.58
NECTIN1-202ENST00000340882 WDR12Q9GZL7 423 aaKnown RBP11.41□□□□□ -0.58
NECTIN1-202ENST00000340882 SAV1Q9H4B6 383 aaPredicted RBP11.41□□□□□ -0.58
NECTIN1-202ENST00000340882 A0A0B4J293 547 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 INS-IGF2F8WCM5 200 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 BUB3O43684 328 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 IGLC1P0CG04 106 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 ETV6P41212 452 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 CBX5P45973 191 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 DHODHQ02127 395 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 RRN3P1Q2M238 152 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
NECTIN1-202ENST00000340882 F6UB75 175 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 IGKV1-5P01602 117 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 P0C879 139 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 AQP4P55087 323 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 SLC35G3Q8N808 338 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 LINC00052Q96N35 136 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 C7orf50Q9BRJ6 194 aaKnown RBP11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 Q9H8V8 135 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 IFT46Q9NQC8 304 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 FAM212BQ9NTI7 297 aaPredicted RBP11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 ANAPC10Q9UM13 185 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 GOLT1BQ9Y3E0 138 aa11.39□□□□□ -0.59
NECTIN1-202ENST00000340882 CORTO00230 105 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 BTF3P20290 206 aaKnown RBP11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 SDC2P34741 201 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 RPL5P46777 297 aaKnown RBP11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 CCL18P55774 89 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 MXD1Q05195 221 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 FCN2Q15485 313 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 ZNF79Q15937 498 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 FOXI2Q6ZQN5 318 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 SSX7Q7RTT5 188 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 CLUHP3Q96NS8 147 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
NECTIN1-202ENST00000340882 A0A0A6YYH2 397 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 A6NJ64 397 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 F5H768 121 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 IL4P05112 153 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 ALDH3B2P48448 385 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 IDNKQ5T6J7 187 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 PRSS54Q6PEW0 395 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 LYSMD2Q8IV50 215 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 OR5H2Q8NGV7 314 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 OR6F1Q8NGZ6 308 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 Q8WTZ3 238 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 RNF141Q8WVD5 230 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
NECTIN1-202ENST00000340882 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 ZNF705GA8MUZ8 300 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 NXPH3O95157 252 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 NAT1P18440 290 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 HOXA1P49639 335 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 RORCP51449 518 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 RND2P52198 227 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 YPEL3P61236 119 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 PSG9Q00887 426 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 FAM78BQ5VT40 261 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 OR1S2Q8NGQ3 325 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 DIABLOQ9NR28 239 aa11.36□□□□□ -0.59
NECTIN1-202ENST00000340882 SOCS3O14543 225 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 ELK1P19419 428 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 OR10J1P30954 320 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 HRH1P35367 487 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 TAS2R20P59543 309 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 UHRF2Q96PU4 802 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 MAGT1Q9H0U3 335 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 VCXQ9H320 206 aa11.35□□□□□ -0.59
NECTIN1-202ENST00000340882 A0A0G2JRQ6 117 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 PLAC8L1A1L4L8 177 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 SMR3BP02814 79 aaPredicted RBP11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 HLA-DMAP28067 261 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 SCAND1P57086 179 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 NRG4Q8WWG1 115 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 FRZBQ92765 325 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 Q9H3A6 140 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 SCPEP1Q9HB40 452 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 HMCN2Q8NDA2 5059 aa11.34□□□□□ -0.59
NECTIN1-202ENST00000340882 A0A0J9YX75 114 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 LYRM9A8MSI8 78 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 M0QYG6 137 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 AZU1P20160 251 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 PAX9P55771 341 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 TAS2R46P59540 309 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 AMTNQ6UX39 209 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 KLK11Q9UBX7 282 aa11.33□□□□□ -0.6
NECTIN1-202ENST00000340882 HSPA13P48723 471 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 PSMB3P49720 205 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 CLINT1Q14677 625 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 TMEM170AQ8WVE7 144 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms