RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 V9GYV3 84 aa15.18■□□□□ 0.02
RFTN1-201ENST00000334133 A0A087X0M5 115 aa15.18■□□□□ 0.02
RFTN1-201ENST00000334133 A0A1B0GX30 115 aa15.18■□□□□ 0.02
RFTN1-201ENST00000334133 RANP62826 216 aaKnown RBP15.18■□□□□ 0.02
RFTN1-201ENST00000334133 LINC00305Q7Z4B0 112 aa15.18■□□□□ 0.02
RFTN1-201ENST00000334133 OR1L6Q8NGR2 347 aa15.18■□□□□ 0.02
RFTN1-201ENST00000334133 PAXXQ9BUH6 204 aa15.18■□□□□ 0.02
RFTN1-201ENST00000334133 HIVEP3Q5T1R4 2406 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 TCRBV4S1A1TA0A5B7 111 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 C9JCJ5 164 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 IGLV1-47P01700 117 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 RPL27AP46776 148 aaKnown RBP15.17■□□□□ 0.02
RFTN1-201ENST00000334133 ZNF137PP52743 207 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 TIGITQ495A1 244 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 PRR31Q5SQ13 230 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 LDLRAD2Q5SZI1 272 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 SSBP3Q9BWW4 388 aaPredicted RBP15.17■□□□□ 0.02
RFTN1-201ENST00000334133 TNFRSF19Q9NS68 423 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 BUB1B-PAK6H3BSN5 160 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 ARF6P62330 175 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 OR4A5Q8NH83 315 aa15.17■□□□□ 0.02
RFTN1-201ENST00000334133 CA7P43166 264 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 COA6Q5JTJ3 125 aaKnown RBP15.16■□□□□ 0.02
RFTN1-201ENST00000334133 RNASEH2CQ8TDP1 164 aaKnown RBP15.16■□□□□ 0.02
RFTN1-201ENST00000334133 RPEQ96AT9 228 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 CLEC7AQ9BXN2 247 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 HILPDAQ9Y5L2 63 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 F2Z2F3 143 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 ATP5IP56385 69 aaPredicted RBP15.16■□□□□ 0.02
RFTN1-201ENST00000334133 PLGLAQ15195 96 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 RPEL1Q2QD12 228 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 KIAA1644Q3SXP7 199 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 MRPL18Q9H0U6 180 aaKnown RBP15.16■□□□□ 0.02
RFTN1-201ENST00000334133 SIGLEC9Q9Y336 463 aa15.16■□□□□ 0.02
RFTN1-201ENST00000334133 MAP1AP78559 2803 aaPredicted RBP15.16■□□□□ 0.02
RFTN1-201ENST00000334133 LGALS7P47929 136 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 PRRX1P54821 245 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 PRR27Q6MZM9 219 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 ST6GALNAC3Q8NDV1 305 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 IGLV2-8P01709 118 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 PDLIM4P50479 330 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 JOSD1Q15040 202 aaPredicted RBP15.15■□□□□ 0.02
RFTN1-201ENST00000334133 FAM71F2Q6NXP2 309 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 C8orf31Q8N9H6 132 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 FAM168AQ92567 244 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 SNURFLB1AK76 121 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 RAB4BP61018 213 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 KLRD1Q13241 179 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 MRPL54Q6P161 138 aaKnown RBP15.15■□□□□ 0.02
RFTN1-201ENST00000334133 SSX8Q7RTT4 187 aa15.15■□□□□ 0.02
RFTN1-201ENST00000334133 ADORA2A-AS1P86434 159 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 FAM103A1Q9BTL3 118 aaKnown RBP15.14■□□□□ 0.01
RFTN1-201ENST00000334133 MSRB2Q9Y3D2 182 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 AMMECR1Q9Y4X0 333 aaPredicted RBP15.14■□□□□ 0.01
RFTN1-201ENST00000334133 A0A1W2PRE2 83 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 PPP1R27Q86WC6 154 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 GBGT1Q8N5D6 347 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 TMEM18Q96B42 140 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 C19orf24Q9BVV8 132 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 S4R3C0 116 aa15.14■□□□□ 0.01
RFTN1-201ENST00000334133 MRPL32Q9BYC8 188 aaKnown RBP15.13■□□□□ 0.01
RFTN1-201ENST00000334133 TOX4O94842 621 aa15.13■□□□□ 0.01
RFTN1-201ENST00000334133 IBA57Q5T440 356 aaKnown RBP15.13■□□□□ 0.01
RFTN1-201ENST00000334133 INS-IGF2F8WCM5 200 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 ISLRO14498 428 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 FBLN7Q53RD9 439 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 FXYD5Q96DB9 178 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 BTF3L4Q96K17 158 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 COMPP49747 757 aaPredicted RBP15.12■□□□□ 0.01
RFTN1-201ENST00000334133 BPIFB3P59826 476 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 IGF2BP2-AS1Q96M15 143 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 TP53TG3Q9ULZ0 132 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 TIMM23O14925 209 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 ZNF329Q86UD4 541 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 TEX45Q8NA69 505 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 OR1L4Q8NGR5 311 aa15.12■□□□□ 0.01
RFTN1-201ENST00000334133 FSTL3O95633 263 aa15.11■□□□□ 0.01
RFTN1-201ENST00000334133 YPEL3P61236 119 aaPredicted RBP15.11■□□□□ 0.01
RFTN1-201ENST00000334133 DEFA6Q01524 100 aa15.11■□□□□ 0.01
RFTN1-201ENST00000334133 ITPR1Q14643 2758 aa15.11■□□□□ 0.01
RFTN1-201ENST00000334133 THAP8Q8NA92 274 aa15.11■□□□□ 0.01
RFTN1-201ENST00000334133 OR8B3Q8NGG8 313 aa15.11■□□□□ 0.01
RFTN1-201ENST00000334133 OR8B2Q96RD0 313 aa15.11■□□□□ 0.01
RFTN1-201ENST00000334133 NAT8BQ9UHF3 227 aa15.11■□□□□ 0.01
RFTN1-201ENST00000334133 CNIH1O95406 144 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 SCGB1D1O95968 90 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 CRYGBP07316 175 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 ZNF664Q8N3J9 261 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 SRSF12Q8WXF0 261 aaKnown RBP15.1■□□□□ 0.01
RFTN1-201ENST00000334133 CELSR1Q9NYQ6 3014 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 TEX22C9J3V5 150 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 GCGP01275 180 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 CRISP2P16562 243 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 MMDQ15546 238 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 KLF17Q5JT82 389 aaPredicted RBP15.1■□□□□ 0.01
RFTN1-201ENST00000334133 KIR3DL3Q8N743 410 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 LY96Q9Y6Y9 160 aa15.1■□□□□ 0.01
RFTN1-201ENST00000334133 SERF1AO75920 110 aa15.09■□□□□ 0.01
RFTN1-201ENST00000334133 BAGE2Q86Y30 109 aa15.09■□□□□ 0.01
RFTN1-201ENST00000334133 PGPA6NDG6 321 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms