RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 C2orf70A6NJV1 201 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 HIGD1CA8MV81 97 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 VWC2LB2RUY7 222 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 M0R2Z0 102 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 WT1P19544 449 aaPredicted RBP15.41■□□□□ 0.06
RTN4-201ENST00000317610 TNFSF4P23510 183 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 MEF2CQ06413 473 aaPredicted RBP15.41■□□□□ 0.06
RTN4-201ENST00000317610 MAJINQ3KP22 176 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 FLYWCH2Q96CP2 140 aaKnown RBP15.41■□□□□ 0.06
RTN4-201ENST00000317610 KLF12Q9Y4X4 402 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 DYSFO75923 2080 aa15.41■□□□□ 0.06
RTN4-201ENST00000317610 ATOH7Q8N100 152 aa15.4■□□□□ 0.06
RTN4-201ENST00000317610 VSTM2AQ8TAG5 236 aa15.4■□□□□ 0.06
RTN4-201ENST00000317610 CBY1Q9Y3M2 126 aa15.4■□□□□ 0.06
RTN4-201ENST00000317610 MUC3AQ02505 3323 aa15.4■□□□□ 0.06
RTN4-201ENST00000317610 SUB1P53999 127 aaKnown RBP eCLIP15.4■□□□□ 0.067e-16■■■□□ 18.3
RTN4-201ENST00000317610 UBE2G1P62253 170 aa15.4■□□□□ 0.06
RTN4-201ENST00000317610 FAM71F2Q6NXP2 309 aa15.4■□□□□ 0.06
RTN4-201ENST00000317610 EPDR1Q9UM22 224 aa15.4■□□□□ 0.06
RTN4-201ENST00000317610 PDPNQ86YL7 162 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 OR4C13Q8NGP0 309 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 MRPL36Q9P0J6 103 aaKnown RBP15.39■□□□□ 0.05
RTN4-201ENST00000317610 COLQQ9Y215 455 aaPredicted RBP15.39■□□□□ 0.05
RTN4-201ENST00000317610 PRRC2CQ9Y520 2896 aaKnown RBP15.39■□□□□ 0.05
RTN4-201ENST00000317610 NCOR1O75376 2440 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 NKX6-3A6NJ46 265 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 CORTO00230 105 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 CA7P43166 264 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 GNG5P63218 68 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 STXBP6Q8NFX7 210 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 URB1-AS1Q96HZ7 61 aa15.39■□□□□ 0.05
RTN4-201ENST00000317610 DSPP15924 2871 aaKnown RBP15.38■□□□□ 0.05
RTN4-201ENST00000317610 IGLV2-23P01705 113 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 GPR6P46095 362 aaPredicted RBP15.38■□□□□ 0.05
RTN4-201ENST00000317610 PRR27Q6MZM9 219 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 RNASEKQ6P5S7 137 aaKnown RBP15.38■□□□□ 0.05
RTN4-201ENST00000317610 LINC00305Q7Z4B0 112 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 ZCCHC24Q8N2G6 241 aaKnown RBP15.38■□□□□ 0.05
RTN4-201ENST00000317610 MLST8Q9BVC4 326 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 SSBP4Q9BWG4 385 aaPredicted RBP15.38■□□□□ 0.05
RTN4-201ENST00000317610 FAM215AQ9Y5M1 114 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 TCF21O43680 179 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 FAM162BQ5T6X4 162 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 ZNF596Q8TC21 504 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 PRSS22Q9GZN4 317 aa15.38■□□□□ 0.05
RTN4-201ENST00000317610 Q56UQ5 140 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 CT83Q5H943 113 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 C10orf55Q5SWW7 151 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 RBMXL3Q8N7X1 1067 aaKnown RBP15.37■□□□□ 0.05
RTN4-201ENST00000317610 GPR82Q96P67 336 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 C1RLQ9NZP8 487 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 IGLL1P15814 213 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 CAMPP49913 170 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 FAM120AOSQ5T036 256 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 PVRIGQ6DKI7 326 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 C8orf31Q8N9H6 132 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 OR4F17Q8NGA8 305 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 PERPQ96FX8 193 aa15.37■□□□□ 0.05
RTN4-201ENST00000317610 SOX21Q9Y651 276 aaPredicted RBP15.37■□□□□ 0.05
RTN4-201ENST00000317610 COL6A3P12111 3177 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 TOMM40O96008 361 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 CRYGCP07315 174 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 CCL3L1P16619 93 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 REG1BP48304 166 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 HBBP68871 147 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 LINC00311Q8N616 119 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 RPP21Q9H633 154 aaKnown RBP15.36■□□□□ 0.05
RTN4-201ENST00000317610 ASCL3Q9NQ33 180 aa15.36■□□□□ 0.05
RTN4-201ENST00000317610 CRXO43186 299 aaPredicted RBP15.35■□□□□ 0.05
RTN4-201ENST00000317610 FCN3O75636 299 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 SLC25A5P05141 298 aaKnown RBP15.35■□□□□ 0.05
RTN4-201ENST00000317610 SPATA12Q7Z6I5 190 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 ZNF492Q9P255 531 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 CEACAM4O75871 244 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 IGHV3-48P01763 117 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 CD40P25942 277 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 HINT1P49773 126 aaPredicted RBP15.35■□□□□ 0.05
RTN4-201ENST00000317610 TMEM200BQ69YZ2 307 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 RPRMLQ8N4K4 120 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 NUP37Q8NFH4 326 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 ST6GALNAC6Q969X2 333 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 TMEM186Q96B77 213 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 WASHC3Q9Y3C0 194 aa15.35■□□□□ 0.05
RTN4-201ENST00000317610 C19orf71A6NCJ1 209 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 PGPA6NDG6 321 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 C22orf46C9J442 243 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 M0R296 226 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 MOSP00540 346 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 PLAUP00749 431 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 MUC15Q8N387 334 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 KIR3DL3Q8N743 410 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 TMEM70Q9BUB7 260 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 COX11Q9Y6N1 276 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 A0A1W2PPI3 338 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 IGLC7A0M8Q6 106 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 DIAPH2-AS1Q14236 149 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 MRGPRG-AS1Q2M3A8 158 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 C22orf34Q6ZV56 151 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 SSX8Q7RTT4 187 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms