RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 K7ERU9 68 aa14.2□□□□□ -0.14
GABRB3-202ENST00000311550 SLC25A15Q9Y619 301 aa14.2□□□□□ -0.14
GABRB3-202ENST00000311550 FAM90A2PQ658T7 463 aa14.2□□□□□ -0.14
GABRB3-202ENST00000311550 EBLN2Q6P2I7 272 aa14.2□□□□□ -0.14
GABRB3-202ENST00000311550 COLCA1Q6ZS62 124 aa14.2□□□□□ -0.14
GABRB3-202ENST00000311550 IGKV1D-17A0A075B6S4 117 aa14.2□□□□□ -0.14
GABRB3-202ENST00000311550 C15orf62A8K5M9 175 aa14.2□□□□□ -0.14
GABRB3-202ENST00000311550 DLX6P56179 175 aa14.19□□□□□ -0.14
GABRB3-202ENST00000311550 FAM53AQ6NSI3 398 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-202ENST00000311550 MIEN1Q9BRT3 115 aa14.19□□□□□ -0.14
GABRB3-202ENST00000311550 PRDM13Q9H4Q3 707 aa14.19□□□□□ -0.14
GABRB3-202ENST00000311550 HIST1H1AQ02539 215 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-202ENST00000311550 KLRB1Q12918 225 aa14.19□□□□□ -0.14
GABRB3-202ENST00000311550 RNF166Q96A37 237 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-202ENST00000311550 ZNF414Q96IQ9 312 aa14.19□□□□□ -0.14
GABRB3-202ENST00000311550 IGKV3-20P01619 116 aa14.19□□□□□ -0.14
GABRB3-202ENST00000311550 SFTPCP11686 197 aa14.19□□□□□ -0.14
GABRB3-202ENST00000311550 ZNF503-AS2A6NEH8 195 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 FABP2P12104 132 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 CDKN1AP38936 164 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 TMEM256Q8N2U0 113 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 CRIM1Q9NZV1 1036 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 ATP5J2P56134 94 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 ERASQ7Z444 233 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 RNASE6Q93091 150 aaKnown RBP14.18□□□□□ -0.14
GABRB3-202ENST00000311550 NBR2O15453 112 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 TRGV3P03979 118 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 HIST1H4GQ99525 98 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 FAM74A4Q5TZK3 123 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 CHODLQ9H9P2 273 aa14.18□□□□□ -0.14
GABRB3-202ENST00000311550 GFRA3O60609 400 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 ZNF324O75467 553 aaPredicted RBP14.17□□□□□ -0.14
GABRB3-202ENST00000311550 RAB9AP51151 201 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 DMRTA1Q5VZB9 504 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 CLEC19AQ6UXS0 136 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 OTORQ9NRC9 128 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 TMEM200BQ69YZ2 307 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 LINC00469Q8N7U9 141 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 M0R381 172 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 CSRP1P21291 193 aaKnown RBP14.17□□□□□ -0.14
GABRB3-202ENST00000311550 PIMREGQ9BSJ6 248 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 TMEM160Q9NX00 188 aa14.17□□□□□ -0.14
GABRB3-202ENST00000311550 CACNA1HO95180 2353 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 H7C2G1 150 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 TIMM23O14925 209 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 GNB1LQ9BYB4 327 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 LOC107984156A0A0G2JMH3 177 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 MLANAQ16655 118 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 ARL17AQ8IVW1 177 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 RNF125Q96EQ8 232 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 WNK2Q9Y3S1 2297 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 PAX9P55771 341 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 CIARTQ8N365 385 aaPredicted RBP14.16□□□□□ -0.14
GABRB3-202ENST00000311550 ZNF257Q9Y2Q1 563 aa14.16□□□□□ -0.14
GABRB3-202ENST00000311550 FOXL1Q12952 345 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 ARL6IP6Q8N6S5 226 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 SOX21Q9Y651 276 aaPredicted RBP14.15□□□□□ -0.14
GABRB3-202ENST00000311550 CYYR1Q96J86 154 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 TRAV8-6A0A0B4J262 113 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 CD33P20138 364 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 FAM106AQ4KMX7 169 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 NUDT10Q8NFP7 164 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 NUDT11Q96G61 164 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 PCNX1Q96RV3 2341 aa14.15□□□□□ -0.14
GABRB3-202ENST00000311550 GZMBP10144 247 aa14.14□□□□□ -0.15
GABRB3-202ENST00000311550 ZNRD1Q9P1U0 126 aa14.14□□□□□ -0.15
GABRB3-202ENST00000311550 MBNL3Q9NUK0 354 aaKnown RBP14.14□□□□□ -0.15
GABRB3-202ENST00000311550 A1L4Q6 167 aa14.14□□□□□ -0.15
GABRB3-202ENST00000311550 FER1L6-AS1Q8NA97 138 aa14.14□□□□□ -0.15
GABRB3-202ENST00000311550 LAMTOR2Q9Y2Q5 125 aa14.14□□□□□ -0.15
GABRB3-202ENST00000311550 CADP27708 2225 aa14.14□□□□□ -0.15
GABRB3-202ENST00000311550 PDLIM4P50479 330 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 PLP1P60201 277 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 GAFA1Q96PS6 74 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 IGHV3OR16-12A0A075B7B8 117 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 ACTL10Q5JWF8 245 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 NEU4Q8WWR8 484 aaPredicted RBP14.13□□□□□ -0.15
GABRB3-202ENST00000311550 GOLGB1Q14789 3259 aaKnown RBP14.13□□□□□ -0.15
GABRB3-202ENST00000311550 IGKV1-39P01597 117 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 IGKV1-16P04430 117 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 IGKV1D-39P04432 117 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 WDR86Q86TI4 376 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 ORMDL3Q8N138 153 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 PSG8Q9UQ74 426 aa14.13□□□□□ -0.15
GABRB3-202ENST00000311550 ZNF474Q6S9Z5 364 aaPredicted RBP14.12□□□□□ -0.15
GABRB3-202ENST00000311550 SYT8Q8NBV8 401 aa14.12□□□□□ -0.15
GABRB3-202ENST00000311550 TSKUQ8WUA8 353 aa14.12□□□□□ -0.15
GABRB3-202ENST00000311550 EXOC3-AS1Q8N2X6 119 aa14.12□□□□□ -0.15
GABRB3-202ENST00000311550 IGHV3-11P01762 117 aa14.12□□□□□ -0.15
GABRB3-202ENST00000311550 DOCK10Q96BY6 2186 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 IGHV2-26A0A0B4J1V2 119 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 IGHV1-8P0DP01 117 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 PPIFP30405 207 aaKnown RBP14.11□□□□□ -0.15
GABRB3-202ENST00000311550 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 IGHG3P01860 377 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 PRSS8Q16651 343 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 NIT1Q86X76 327 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 SCRT1Q9BWW7 348 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 DOCK11Q5JSL3 2073 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 C9JCJ5 164 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms