RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 NAA60Q9H7X0 242 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.29□□□□□ -0.92
CD44-203ENST00000278386 HELTA6NFD8 242 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 DISC1C4P0D8 188 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 C11orf94C9JXX5 98 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 SLC25A4P12235 298 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 MIFP14174 115 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 OR10J1P30954 320 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 TCTAP57738 103 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 MRPS10P82664 201 aaKnown RBP9.28□□□□□ -0.92
CD44-203ENST00000278386 PSMG4Q5JS54 123 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 Q6ZRM9 215 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 OR52E5Q8NH55 327 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 DCANP1Q8TF63 244 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 Q8WTZ3 238 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 CLEC5AQ9NY25 188 aa9.28□□□□□ -0.92
CD44-203ENST00000278386 CDS2O95674 445 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 IL4P05112 153 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 IGLC1P0CG04 106 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 HLA-DMBP28068 263 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 DHODHQ02127 395 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 SSBP1Q04837 148 aaKnown RBP9.27□□□□□ -0.93
CD44-203ENST00000278386 C2orf83Q53S99 150 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 PRSS54Q6PEW0 395 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 Q6ZTC4 211 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 SELENOHQ8IZQ5 122 aaKnown RBP9.27□□□□□ -0.93
CD44-203ENST00000278386 RNASEH2CQ8TDP1 164 aaKnown RBP9.27□□□□□ -0.93
CD44-203ENST00000278386 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 ACY3Q96HD9 319 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 MIXL1Q9H2W2 232 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 HRH4Q9H3N8 390 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 TBC1D24Q9ULP9 559 aa9.27□□□□□ -0.93
CD44-203ENST00000278386 TRAV10A0A0B4J240 114 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 ZNF705EA8MWA4 302 aaPredicted RBP9.26□□□□□ -0.93
CD44-203ENST00000278386 GIG44P09565 113 aaPredicted RBP9.26□□□□□ -0.93
CD44-203ENST00000278386 AKAIN1P0CW23 69 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 RBMY1A1P0DJD3 496 aaKnown RBP9.26□□□□□ -0.93
CD44-203ENST00000278386 RBMY1CP0DJD4 496 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 NPY1RP25929 384 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 SNRPD3P62318 126 aaKnown RBP9.26□□□□□ -0.93
CD44-203ENST00000278386 PRR20EP86478 221 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 PRR20CP86479 221 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 PRR20DP86480 221 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 PRR20BP86481 221 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 PRR20AP86496 221 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 IL18Q14116 193 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 SPCS2Q15005 226 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 RBMY1FQ15415 496 aaKnown RBP9.26□□□□□ -0.93
CD44-203ENST00000278386 SURF2Q15527 256 aaPredicted RBP9.26□□□□□ -0.93
CD44-203ENST00000278386 AARDQ4LEZ3 155 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 ETFRF1Q6IPR1 90 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 C16orf54Q6UWD8 224 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 OR4C16Q8NGL9 310 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 SMIM4Q8WVI0 70 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 GLMPQ8WWB7 406 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 GPR146Q96CH1 333 aa9.26□□□□□ -0.93
CD44-203ENST00000278386 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
CD44-203ENST00000278386 GSTZ1O43708 216 aaPredicted RBP9.25□□□□□ -0.93
CD44-203ENST00000278386 SULT1A3P0DMM9 295 aa9.25□□□□□ -0.93
CD44-203ENST00000278386 SULT1A4P0DMN0 295 aa9.25□□□□□ -0.93
CD44-203ENST00000278386 AP2S1P53680 142 aaPredicted RBP9.25□□□□□ -0.93
CD44-203ENST00000278386 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
CD44-203ENST00000278386 USF2Q15853 346 aaPredicted RBP9.25□□□□□ -0.93
CD44-203ENST00000278386 SIGLEC15Q6ZMC9 328 aa9.25□□□□□ -0.93
CD44-203ENST00000278386 APLNQ9ULZ1 77 aa9.25□□□□□ -0.93
CD44-203ENST00000278386 U3KQE9 123 aa9.25□□□□□ -0.93
CD44-203ENST00000278386 X6R8D5 127 aa9.25□□□□□ -0.93
CD44-203ENST00000278386 HERC2O95714 4834 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 IGHV4-4A0A075B6R2 117 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 ELOA3CA0A087WX78 387 aaPredicted RBP9.24□□□□□ -0.93
CD44-203ENST00000278386 FAM90A26D6RGX4 464 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 TOMM40O96008 361 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 IFNA10P01566 189 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 NUTF2P61970 127 aaKnown RBP9.24□□□□□ -0.93
CD44-203ENST00000278386 GPR141Q7Z602 305 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 NOXA1Q86UR1 476 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 CLVS1Q8IUQ0 354 aaPredicted RBP9.24□□□□□ -0.93
CD44-203ENST00000278386 TMEM170AQ8WVE7 144 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 NPIPB3Q92617 1050 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 RAB40CQ96S21 281 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 PRRT1Q99946 306 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 PBDC1Q9BVG4 233 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 C1QTNF4Q9BXJ3 329 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 NRN1Q9NPD7 142 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 PRR13Q9NZ81 148 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 CELA1Q9UNI1 258 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 GPR132Q9UNW8 380 aa9.24□□□□□ -0.93
CD44-203ENST00000278386 CTDSP2O14595 271 aa9.23□□□□□ -0.93
CD44-203ENST00000278386 RD3LP0DJH9 198 aa9.23□□□□□ -0.93
CD44-203ENST00000278386 NUP62P37198 522 aaPredicted RBP9.23□□□□□ -0.93
CD44-203ENST00000278386 OR51S1Q8NGJ8 323 aa9.23□□□□□ -0.93
CD44-203ENST00000278386 DIRAS2Q96HU8 199 aa9.23□□□□□ -0.93
CD44-203ENST00000278386 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
CD44-203ENST00000278386 CACFD1Q9UGQ2 172 aa9.23□□□□□ -0.93
CD44-203ENST00000278386 KCNIP3Q9Y2W7 256 aa9.23□□□□□ -0.93
CD44-203ENST00000278386 PSG1P11464 419 aa9.22□□□□□ -0.93
CD44-203ENST00000278386 NMSQ5H8A3 153 aa9.22□□□□□ -0.93
CD44-203ENST00000278386 ZNF767PQ75MW2 155 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms