RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 BCL6BQ8N143 479 aaPredicted RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 ANKRD17O75179 2603 aaKnown RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 TRAV8-6A0A0B4J262 113 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 C17orf51A8MQB3 221 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 LINC01565O15544 149 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 RPL27AP46776 148 aaKnown RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 ZXDCQ2QGD7 858 aaPredicted RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 NUP37Q8NFH4 326 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 GATAD1Q8WUU5 269 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 IGKV1D-42A0A075B6H8 117 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 MLNRO43193 412 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 TIAF1O95411 115 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 NRN1LQ496H8 165 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 EDA2RQ9HAV5 297 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 FBLN5Q9UBX5 448 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 NEUROG3Q9Y4Z2 214 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 GUSBP1Q15486 140 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 CACNG8Q8WXS5 425 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 RAX2Q96IS3 184 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 C16orf97H3BN30 126 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 RPP25Q9BUL9 199 aaKnown RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 HOXA3O43365 443 aaPredicted RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 C3AR1Q16581 482 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 GAGE2AQ6NT46 116 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 TMEM52Q8NDY8 209 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 OR10J6PQ8NGY7 276 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 RTBDNQ9BSG5 229 aaPredicted RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 PHLDA3Q9Y5J5 127 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 NPIPB6E9PJ23 425 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 FNDC10F2Z333 226 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 SYS1-DBNDD2H3BUS1 97 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 TIMP3P35625 211 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 CRYBA2P53672 197 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 ECSCRQ19T08 205 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 MPV17P39210 176 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 MAGEA5P43359 124 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 MIC13Q5XKP0 118 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 Q6AWC8 147 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 MORN3Q6PF18 240 aaPredicted RBP4.82□□□□□ -1.64
VCAN-201ENST00000265077 ZNF488Q96MN9 340 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 NUP210LQ5VU65 1888 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 IGLC7A0M8Q6 106 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 DNAL4O96015 105 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 C5orf64Q2M2E5 130 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 OR5P3Q8WZ94 311 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 PRTN3P24158 256 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 UNC119Q13432 240 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 C19orf54Q5BKX5 351 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 RASL11AQ6T310 242 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 TNFRSF19Q9NS68 423 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 BEX4Q9NWD9 120 aaPredicted RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 FOXA3P55318 350 aaPredicted RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 C10orf128Q5T292 105 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 SCARF2Q96GP6 870 aaPredicted RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 KIR2DL4Q99706 377 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 SSBP3Q9BWW4 388 aaPredicted RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 A0A1B0GUS0 222 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 IGFBP3P17936 291 aaPredicted RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 TRBV20-1A0A075B6N2 111 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 TEX48A0A1B0GUV7 120 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 FOXH1O75593 365 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 APOHP02749 345 aaPredicted RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 MGPP08493 103 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 EPDR1Q9UM22 224 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 PFN1P07737 140 aaKnown RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 AMELYQ99218 206 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 SLC25A2Q9BXI2 301 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 RAXQ9Y2V3 346 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 FAM157AC9JC47 383 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 PEX7O00628 323 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 IL11P20809 199 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 WFDC6Q9BQY6 131 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 ZNF319Q9P2F9 582 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 A0A0J9YW62 118 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 PGPA6NDG6 321 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 C1orf210Q8IVY1 113 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 RND1Q92730 232 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 AICDAQ9GZX7 198 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 C11orf68Q9H3H3 251 aaKnown RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 LILRA1O75019 489 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 TRACP01848 142 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 FAM106CPP0CH98 169 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 TMEM155Q4W5P6 130 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 LGALS3P17931 250 aaKnown RBP4.81□□□□□ -1.64
VCAN-201ENST00000265077 EBLN2Q6P2I7 272 aa4.81□□□□□ -1.64
VCAN-201ENST00000265077 A0A1W2PRE2 83 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 TMEM229AB2RXF0 380 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 TNFRSF6BO95407 300 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 EGR1P18146 543 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 IGLV3-21P80748 117 aaPredicted RBP4.8□□□□□ -1.64
VCAN-201ENST00000265077 ASPHD2Q6ICH7 369 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 MAFAQ8NHW3 353 aaPredicted RBP4.8□□□□□ -1.64
VCAN-201ENST00000265077 APOBEC4Q8WW27 367 aaKnown RBP4.8□□□□□ -1.64
VCAN-201ENST00000265077 CALYQ9NYX4 217 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 IGHV3OR15-7A0A075B7D8 119 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 IGHV1-45A0A0A0MS14 117 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 LINC01559Q495D7 138 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 FAM90A2PQ658T7 463 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 WBP1Q96G27 269 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms