RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TMEM160Q9NX00 188 aa17.9■□□□□ 0.46
SMARCB1-201ENST00000263121 LINC00527Q9UJ94 153 aa17.9■□□□□ 0.46
SMARCB1-201ENST00000263121 AP4M1O00189 453 aa17.9■□□□□ 0.46
SMARCB1-201ENST00000263121 EIF3GO75821 320 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMARCB1-201ENST00000263121 HNF1AP20823 631 aa17.9■□□□□ 0.46
SMARCB1-201ENST00000263121 FAM210AQ96ND0 272 aa17.9■□□□□ 0.46
SMARCB1-201ENST00000263121 SCRT1Q9BWW7 348 aa17.9■□□□□ 0.46
SMARCB1-201ENST00000263121 PSMB11A5LHX3 300 aa17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 F8W735 103 aaPredicted RBP17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 PPIFP30405 207 aaKnown RBP17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 MFAP4P55083 255 aa17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 SRSF3P84103 164 aaKnown RBP17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 DEFA5Q01523 94 aa17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 VN1R17PQ8TDU5 208 aa17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 C21orf62Q9NYP8 219 aa17.89■□□□□ 0.45
SMARCB1-201ENST00000263121 A0A1W2PPV4 95 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 IGKV1-17P01599 117 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 NPBWR1P48145 328 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 FGF8P55075 233 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 RHOGP84095 191 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 TMEM86BQ8N661 226 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 NOL4LQ96MY1 436 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 ZNF355PQ9NSJ1 428 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 S4R3C0 116 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 MYO9AB2RTY4 2548 aa17.88■□□□□ 0.45
SMARCB1-201ENST00000263121 ANKRD34BA5PLL1 514 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 I3L521 148 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 HMGB3O15347 200 aaKnown RBP17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 BRI3O95415 125 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 FCGR2BP31994 310 aaPredicted RBP17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 RHOBP62745 196 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 NECAP1Q8NC96 275 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 C19orf24Q9BVV8 132 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 SEPSECSQ9HD40 501 aaKnown RBP17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 MXRA5Q9NR99 2828 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 TIGITQ495A1 244 aa17.87■□□□□ 0.45
SMARCB1-201ENST00000263121 CD5P06127 495 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 OR5G3P0C626 314 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 CFHR3Q02985 330 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 GUK1Q16774 197 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 C15orf32Q32M92 178 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 TMEM37Q8WXS4 190 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 TXN2Q99757 166 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 SMR3AQ99954 134 aa17.86■□□□□ 0.45
SMARCB1-201ENST00000263121 TRAV30A0A087WSZ9 112 aa17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 H3BUA1 57 aa17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 TOR2AQ5JU69 321 aa17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 SPATA31B1PQ5VZV4 182 aa17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 GATAD1Q8WUU5 269 aa17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 NPFFR1Q9GZQ6 430 aa17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 TMEM231Q9H6L2 316 aa17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 ANK3Q12955 4377 aaKnown RBP17.85■□□□□ 0.45
SMARCB1-201ENST00000263121 GNG7O60262 68 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 STAG3L2P0CL84 134 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 STAG3L3P0CL85 134 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 PMS2P11Q13670 270 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 FAM78BQ5VT40 261 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 ZNF502Q8TBZ5 544 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 MS4A10Q96PG2 267 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 PBDC1Q9BVG4 233 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 PRSS22Q9GZN4 317 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 DNAJC4Q9NNZ3 241 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 FUT9Q9Y231 359 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 TLN2Q9Y4G6 2542 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 OTOGQ6ZRI0 2925 aa17.84■□□□□ 0.45
SMARCB1-201ENST00000263121 FAM223BA6NKX1 122 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 LY6G6DO95868 133 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 PSG1P11464 419 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 PLP1P60201 277 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 TMEM95Q3KNT9 176 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 Q56UQ5 140 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 PATE2Q6UY27 113 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 FAM223AQ8IWN6 122 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 OR1L4Q8NGR5 311 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 PFDN5Q99471 154 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 ZNF702PQ9H963 129 aa17.83■□□□□ 0.45
SMARCB1-201ENST00000263121 RBFOX3A6NFN3 312 aa17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 IGHV3-23P01764 117 aa17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 FABP1P07148 127 aa17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 RBMS3Q6XE24 437 aaKnown RBP17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 MIR17HGQ75NE6 70 aa17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 RNF2Q99496 336 aa17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 MRPL32Q9BYC8 188 aaKnown RBP17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 TREM1Q9NP99 234 aa17.83■□□□□ 0.44
SMARCB1-201ENST00000263121 ACANP16112 2415 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 COX7A2P2O60397 106 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 TOMM40O96008 361 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 IGLV1-40P01703 118 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 YPEL3P61236 119 aaPredicted RBP17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 DUX5Q96PT3 197 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 EIF5A2Q9GZV4 153 aaKnown RBP17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 TMPRSS5Q9H3S3 457 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 DOK5Q9P104 306 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 GNG13Q9P2W3 67 aa17.82■□□□□ 0.44
SMARCB1-201ENST00000263121 C9JQL5 133 aa17.81■□□□□ 0.44
SMARCB1-201ENST00000263121 RD3LP0DJH9 198 aa17.81■□□□□ 0.44
SMARCB1-201ENST00000263121 PEA15Q15121 130 aa17.81■□□□□ 0.44
SMARCB1-201ENST00000263121 HAGHQ16775 308 aa17.81■□□□□ 0.44
SMARCB1-201ENST00000263121 C10orf113Q5VZT2 155 aa17.81■□□□□ 0.44
SMARCB1-201ENST00000263121 LINC00052Q96N35 136 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 506.4 ms