RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 BAGE2Q86Y30 109 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 SGMS2Q8NHU3 365 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM213BQ8TBF2 198 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM186Q96B77 213 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 MS4A7Q9GZW8 240 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 NAA60Q9H7X0 242 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 A0A0G2JLM5 398 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF729A6NN14 1252 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 SLC25A4P12235 298 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 TCTAP57738 103 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 GNB1P62873 340 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 HLA-DRB3P79483 266 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 SLC9A3R2Q15599 337 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 POU2AF1Q16633 256 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 OR4A47Q6IF82 309 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 TMUB2Q71RG4 321 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 SLC24A4Q8NFF2 622 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM37Q8WXS4 190 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 SAT2Q96F10 170 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 TMPRSS5Q9H3S3 457 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 A0A1B0GW15 77 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 OOSP1A8MZH6 123 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 HAND1O96004 215 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 HPRT1P00492 218 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 APOHP02749 345 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 FGF7P21781 194 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 RPL12P30050 165 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 AMTP48728 403 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 OR5I1Q13606 314 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 MMD2Q8IY49 270 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 Q8N1Y9 231 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 Q8N9W7 124 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 C2CD4CQ8TF44 421 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 APOC3P02656 99 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 NQO2P16083 231 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 ACSM6Q6P461 480 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF114Q8NC26 417 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 OR11H6Q8NGC7 330 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF418Q8TF45 676 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 GATAD1Q8WUU5 269 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 MRPL32Q9BYC8 188 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 PEMTQ9UBM1 199 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 CLN8Q9UBY8 286 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 NUPL2O15504 423 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 TOX4O94842 621 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 NDUFA3O95167 84 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 FOSL1P15407 271 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 FCGR2CP31995 323 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 GAMTQ14353 236 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 FA2HQ7L5A8 372 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 C19orf73Q9NVV2 129 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 JPT1Q9UK76 154 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 RNF114Q9Y508 228 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 RAB29O14966 203 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 OR5G3P0C626 314 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 IGHV4-31P0DP07 118 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 NUTF2P61970 127 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 MRPS11P82912 194 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF90Q03938 601 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 LINC01559Q495D7 138 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 TGIF2LXQ8IUE1 241 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 RTN4IP1Q8WWV3 396 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 GPR146Q96CH1 333 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 FLYWCH2Q96CP2 140 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 NABP2Q9BQ15 211 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 SIRT7Q9NRC8 400 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM74A7A6NL05 159 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 H7C1H1 209 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 BMPR1BO00238 502 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 MGST1P10620 155 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 SLC25A6P12236 298 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 PRDX2P32119 198 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 Q3ZCU0 254 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 PDPNQ86YL7 162 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 PPP1R3CQ9UQK1 317 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 WSB1Q9Y6I7 421 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 TRBV9A0A0B4J1U6 114 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM90A27PA6NNH2 459 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 HMSDA8MTL9 139 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 H0YJW9 148 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 M0R1X1 148 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 CLEC12BQ2HXU8 276 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 RPEL1Q2QD12 228 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 RPP25LQ8N5L8 163 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF714Q96N38 554 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 GGACTQ9BVM4 153 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 IDI2-AS1Q9NZ38 188 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 WASHC3Q9Y3C0 194 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 U3KQ87 197 aa4.35□□□□□ -1.71
TOPBP1-201ENST00000260810 C3orf85A0A1B0GTC6 90 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 APOBEC3AP31941 199 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 BLCAPP62952 87 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 PRSS54Q6PEW0 395 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM14EPQ6UXP3 125 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 EEF1AKMT3Q96AZ1 226 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 METTL26Q96S19 204 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 NCOR1P1Q9H4R4 102 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms