RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NSG2Q9Y328 171 aa11.2□□□□□ -0.62
UPK3A-201ENST00000216211 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
UPK3A-201ENST00000216211 LOC102724200A0A096LPH7 203 aaPredicted RBP11.19□□□□□ -0.62
UPK3A-201ENST00000216211 IGHV3-21A0A0B4J1V1 117 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 OR2T8A6NH00 312 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 CYB5BO43169 146 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 FGF2P09038 288 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 SLC25A6P12236 298 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 LPAR6P43657 344 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 ELLP55199 621 aaPredicted RBP11.19□□□□□ -0.62
UPK3A-201ENST00000216211 RAB32Q13637 225 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 NMSQ5H8A3 153 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 THOC7Q6I9Y2 204 aaKnown RBP11.19□□□□□ -0.62
UPK3A-201ENST00000216211 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 OR1L6Q8NGR2 347 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 OVOL2Q9BRP0 275 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 HINT2Q9BX68 163 aa11.19□□□□□ -0.62
UPK3A-201ENST00000216211 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 TSC22D2O75157 780 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 KRASP01116 189 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 G6PCP35575 357 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 MFAP2P55001 183 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 OR2C3Q8N628 320 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 OR4D5Q8NGN0 318 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 LSM10Q969L4 123 aaKnown RBP11.18□□□□□ -0.62
UPK3A-201ENST00000216211 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 UBQLN2Q9UHD9 624 aa11.18□□□□□ -0.62
UPK3A-201ENST00000216211 IGKV1-39P01597 117 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 MBPP02686 304 aaPredicted RBP11.17□□□□□ -0.62
UPK3A-201ENST00000216211 RLN2P04090 185 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 IGKV1D-39P04432 117 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 TEX261Q6UWH6 196 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 HSD17B13Q7Z5P4 300 aaPredicted RBP11.17□□□□□ -0.62
UPK3A-201ENST00000216211 INO80EQ8NBZ0 244 aaPredicted RBP11.17□□□□□ -0.62
UPK3A-201ENST00000216211 OR1S1Q8NH92 325 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 BSCL2Q96G97 398 aaPredicted RBP11.17□□□□□ -0.62
UPK3A-201ENST00000216211 CHRDL1Q9BU40 450 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 ARL6Q9H0F7 186 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 OR5AC2Q9NZP5 309 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 OR51B2Q9Y5P1 312 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
UPK3A-201ENST00000216211 U3KQ87 197 aa11.17□□□□□ -0.62
UPK3A-201ENST00000216211 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 A0A1B0GU03 582 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 K7EPK0 472 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 DEDDO75618 318 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 NUP62P37198 522 aaPredicted RBP11.16□□□□□ -0.62
UPK3A-201ENST00000216211 S100A10P60903 97 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 SMCO1Q147U7 214 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 UBAC2Q8NBM4 344 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 ZNF680Q8NEM1 530 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 SCARB1Q8WTV0 552 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 AQP10Q96PS8 301 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 C21orf62Q9NYP8 219 aa11.16□□□□□ -0.62
UPK3A-201ENST00000216211 F8W735 103 aaPredicted RBP11.15□□□□□ -0.62
UPK3A-201ENST00000216211 TSPAN4O14817 238 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 ST8SIA3O43173 380 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 ZNF207O43670 478 aaKnown RBP11.15□□□□□ -0.62
UPK3A-201ENST00000216211 PITX3O75364 302 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 ID3Q02535 119 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 NDUFA5Q16718 116 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 SPSB3Q6PJ21 355 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 GPR146Q96CH1 333 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 RRNAD1Q96FB5 475 aaKnown RBP11.15□□□□□ -0.62
UPK3A-201ENST00000216211 SPAG8Q99932 426 aaPredicted RBP11.15□□□□□ -0.62
UPK3A-201ENST00000216211 C20orf24Q9BUV8 137 aa11.15□□□□□ -0.62
UPK3A-201ENST00000216211 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
UPK3A-201ENST00000216211 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 E5RGE8 158 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 K7EIM0 57 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 NDUFA4O00483 81 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 BCL2L11O43521 198 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 ATG12O94817 140 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 IFNA7P01567 189 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 IGKV1-5P01602 117 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 ADMP35318 185 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 AP2S1P53680 142 aaPredicted RBP11.14□□□□□ -0.63
UPK3A-201ENST00000216211 Q56UQ5 140 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 FAM219AQ8IW50 185 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 C11orf1Q9H5F2 150 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
UPK3A-201ENST00000216211 LSM5Q9Y4Y9 91 aaKnown RBP11.14□□□□□ -0.63
UPK3A-201ENST00000216211 A0A0J9YWU9 116 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 C15orf61A6NNL5 157 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 SCGB1D2O95969 90 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 P0C879 139 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 NKX2-1P43699 371 aaPredicted RBP11.13□□□□□ -0.63
UPK3A-201ENST00000216211 DEFB135Q30KP9 77 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 ODF3L2Q3SX64 289 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 ARPC5LQ9BPX5 153 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 TMEM14BQ9NUH8 114 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
UPK3A-201ENST00000216211 A0A0G2JRQ6 117 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms