RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SMIM17P0DL12 118 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 LOXP28300 417 aaPredicted RBP4.52□□□□□ -1.69
CHD2-227ENST00000637572 HERPUD1Q15011 391 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 LYPD2Q6UXB3 125 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 VDAC2P45880 294 aaPredicted RBP4.52□□□□□ -1.69
CHD2-227ENST00000637572 C5orf64Q2M2E5 130 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 BSXQ3C1V8 233 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 EBLN2Q6P2I7 272 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 WDR73Q6P4I2 378 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 OR5AU1Q8NGC0 362 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 TPPP3Q9BW30 176 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 ANKRD17O75179 2603 aaKnown RBP4.52□□□□□ -1.69
CHD2-227ENST00000637572 IGHV3OR16-10A0A075B7F0 116 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 C20orf202A1L168 122 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 PAGE4O60829 102 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 APELAP0DMC3 54 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 CCKARP32238 428 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 SUPT4H1P63272 117 aaKnown RBP4.51□□□□□ -1.69
CHD2-227ENST00000637572 MEF2BQ02080 365 aaPredicted RBP4.51□□□□□ -1.69
CHD2-227ENST00000637572 GTF3C1Q12789 2109 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 MIC13Q5XKP0 118 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 RNF144BQ7Z419 303 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 RSG1Q9BU20 258 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 NPCDR1Q9BY65 106 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 SAMD10Q9BYL1 202 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 OR51M1Q9H341 326 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 PEMTQ9UBM1 199 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 ZNF705GA8MUZ8 300 aaPredicted RBP4.51□□□□□ -1.69
CHD2-227ENST00000637572 RAMP3O60896 148 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 FAM157CP0CG43 387 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 RPL29P47914 159 aaKnown RBP4.51□□□□□ -1.69
CHD2-227ENST00000637572 FGF8P55075 233 aaPredicted RBP4.51□□□□□ -1.69
CHD2-227ENST00000637572 RUNX1Q01196 453 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 SPSB3Q6PJ21 355 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 OR10J6PQ8NGY7 276 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 MDFIQ99750 246 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 FUT9Q9Y231 359 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 FLNCQ14315 2725 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 MED13Q9UHV7 2174 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 IGHV1-69DA0A0B4J2H0 117 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 DBX1A6NMT0 343 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 FOXI3A8MTJ6 420 aaPredicted RBP4.51□□□□□ -1.69
CHD2-227ENST00000637572 HSBP1L1C9JCN9 74 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 OR2J3O76001 311 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 IGHV1-69P01742 117 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 CD300CQ08708 224 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 IZUMO4Q1ZYL8 232 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 TMEM78Q5T7P6 136 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 PRR27Q6MZM9 219 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 ZNF600Q6ZNG1 722 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 ZNF833PQ6ZTB9 187 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 LYPD6Q86Y78 171 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 C11orf53Q8IXP5 236 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 USMG5Q96IX5 58 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 IGSF10Q6WRI0 2623 aa4.51□□□□□ -1.69
CHD2-227ENST00000637572 A0A0B4J293 547 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 TEX50A0A1B0GTY4 177 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 SERTM2A0A1B0GWG4 89 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 TMEM250H0YL14 139 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 SOD3P08294 240 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 TSPOP30536 169 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 ZNF383Q8NA42 475 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 OR11H4Q8NGC9 324 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 HIST1H2BAQ96A08 127 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 UFC1Q9Y3C8 167 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 C15orf65H3BRN8 121 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 IGHV2-5P01817 119 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 TFF1P04155 84 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 IL4P05112 153 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 IL6RP08887 468 aaPredicted RBP4.5□□□□□ -1.69
CHD2-227ENST00000637572 NMBP08949 121 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 FCGR2BP31994 310 aaPredicted RBP4.5□□□□□ -1.69
CHD2-227ENST00000637572 SNRPD3P62318 126 aaKnown RBP4.5□□□□□ -1.69
CHD2-227ENST00000637572 USF2Q15853 346 aaPredicted RBP4.5□□□□□ -1.69
CHD2-227ENST00000637572 BAGE2Q86Y30 109 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 OR10G8Q8NGN5 311 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 TMEM208Q9BTX3 173 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 ZMAT5Q9UDW3 170 aaKnown RBP4.5□□□□□ -1.69
CHD2-227ENST00000637572 SIGLEC9Q9Y336 463 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 XIRP2A4UGR9 3374 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 BPTFQ12830 3046 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 TRAV41A0A0B4J266 112 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 P01737 135 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 C17orf58Q2M2W7 97 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 DEFB113Q30KQ7 82 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 C12orf54Q6X4T0 127 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 BAGE3Q86Y29 109 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 NECAP1Q8NC96 275 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 MS4A10Q96PG2 267 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 RNF126Q9BV68 326 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 WDR83OSQ9Y284 106 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 IGHV3-21A0A0B4J1V1 117 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 RNF222A6NCQ9 220 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 G3V3Q6 166 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 REG1AP05451 166 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 CTRB1P17538 263 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 SAA4P35542 130 aa4.5□□□□□ -1.69
CHD2-227ENST00000637572 CMC4P56277 68 aaPredicted RBP4.5□□□□□ -1.69
CHD2-227ENST00000637572 RPS20P60866 119 aaKnown RBP4.5□□□□□ -1.69
CHD2-227ENST00000637572 RPL30P62888 115 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms