RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 SCPEP1Q9HB40 452 aa13.23□□□□□ -0.29
CTSD-209ENST00000637158 IGHV4-4A0A075B6R2 117 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 A0A1B0GU03 582 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 CLN5O75503 358 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 IFNA17P01571 189 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 GIG44P09565 113 aaPredicted RBP13.22□□□□□ -0.29
CTSD-209ENST00000637158 CRYBB3P26998 211 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 Q6ZTC4 211 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 TMEM230Q96A57 120 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 ZNF486Q96H40 463 aaPredicted RBP13.22□□□□□ -0.29
CTSD-209ENST00000637158 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
CTSD-209ENST00000637158 RPS19P39019 145 aaKnown RBP13.21□□□□□ -0.29
CTSD-209ENST00000637158 P2RY1P47900 373 aa13.21□□□□□ -0.29
CTSD-209ENST00000637158 AP2S1P53680 142 aaPredicted RBP13.21□□□□□ -0.29
CTSD-209ENST00000637158 OR4X1Q8NH49 305 aa13.21□□□□□ -0.29
CTSD-209ENST00000637158 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
CTSD-209ENST00000637158 DYNC1H1Q14204 4646 aaKnown RBP13.2□□□□□ -0.3
CTSD-209ENST00000637158 TRAV30A0A087WSZ9 112 aa13.2□□□□□ -0.3
CTSD-209ENST00000637158 HELTA6NFD8 242 aa13.2□□□□□ -0.3
CTSD-209ENST00000637158 RCVRNP35243 200 aa13.2□□□□□ -0.3
CTSD-209ENST00000637158 RPL5P46777 297 aaKnown RBP13.2□□□□□ -0.3
CTSD-209ENST00000637158 NUTF2P61970 127 aaKnown RBP13.2□□□□□ -0.3
CTSD-209ENST00000637158 C1QTNF4Q9BXJ3 329 aa13.2□□□□□ -0.3
CTSD-209ENST00000637158 X6R8D5 127 aa13.2□□□□□ -0.3
CTSD-209ENST00000637158 DNAH11Q96DT5 4516 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 ZNF688P0C7X2 276 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 P0DMU3 169 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 OPRK1P41145 380 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 AKR1C2P52895 323 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 RND3P61587 244 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 SPINK9Q5DT21 86 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 ACTL10Q5JWF8 245 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 DCANP1Q8TF63 244 aa13.19□□□□□ -0.3
CTSD-209ENST00000637158 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
CTSD-209ENST00000637158 A0A0B4J293 547 aa13.18□□□□□ -0.3
CTSD-209ENST00000637158 APOA1P02647 267 aa13.18□□□□□ -0.3
CTSD-209ENST00000637158 AMBPP02760 352 aa13.18□□□□□ -0.3
CTSD-209ENST00000637158 MED14OSP0DP75 135 aa13.18□□□□□ -0.3
CTSD-209ENST00000637158 RNASE2P10153 161 aaKnown RBP13.18□□□□□ -0.3
CTSD-209ENST00000637158 C4BPBP20851 252 aa13.18□□□□□ -0.3
CTSD-209ENST00000637158 NPY1RP25929 384 aa13.18□□□□□ -0.3
CTSD-209ENST00000637158 HOXA1P49639 335 aaPredicted RBP13.18□□□□□ -0.3
CTSD-209ENST00000637158 CSNK1G2-AS1Q8NCQ2 148 aa13.18□□□□□ -0.3
CTSD-209ENST00000637158 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 RPS10-NUDT3A0A1W2PQS6 291 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 KNCNA6PVL3 124 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 IGKV1-5P01602 117 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 PGAM2P15259 253 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 TGFBR1P36897 503 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 POM121L12Q8N7R1 296 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 RRNAD1Q96FB5 475 aaKnown RBP13.17□□□□□ -0.3
CTSD-209ENST00000637158 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
CTSD-209ENST00000637158 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
CTSD-209ENST00000637158 B3GALNT1O75752 331 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 ATP6V1G2O95670 118 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 P0C879 139 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 ETV6P41212 452 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 PPP5CP53041 499 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 PIGPP57054 158 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 SNRPD3P62318 126 aaKnown RBP13.16□□□□□ -0.3
CTSD-209ENST00000637158 DHRS2Q13268 280 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 IZUMO4Q1ZYL8 232 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 Q8WTZ3 238 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 RAB40CQ96S21 281 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 FNDC4Q9H6D8 234 aaPredicted RBP13.16□□□□□ -0.3
CTSD-209ENST00000637158 CLEC5AQ9NY25 188 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 COMMD3Q9UBI1 195 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 PKD1P98161 4303 aa13.16□□□□□ -0.3
CTSD-209ENST00000637158 C3orf85A0A1B0GTC6 90 aa13.15□□□□□ -0.3
CTSD-209ENST00000637158 HTR2BP41595 481 aa13.15□□□□□ -0.3
CTSD-209ENST00000637158 TRIM16LQ309B1 348 aa13.15□□□□□ -0.3
CTSD-209ENST00000637158 SNX29P2Q8IUI4 249 aa13.15□□□□□ -0.3
CTSD-209ENST00000637158 ARRDC1Q8N5I2 433 aa13.15□□□□□ -0.3
CTSD-209ENST00000637158 TP53RKQ96S44 253 aa13.15□□□□□ -0.3
CTSD-209ENST00000637158 VCX3AQ9NNX9 186 aa13.15□□□□□ -0.3
CTSD-209ENST00000637158 AGRNO00468 2067 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 A0A1B0GVY2 172 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 IGKV1-17P01599 117 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 HNRNPCP07910 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTSD-209ENST00000637158 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
CTSD-209ENST00000637158 C12orf74Q32Q52 190 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 BSXQ3C1V8 233 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 PSMG4Q5JS54 123 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 CCDC71LQ8N9Z2 235 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 OR1S2Q8NGQ3 325 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 ZFAND1Q8TCF1 268 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
CTSD-209ENST00000637158 COPZ2Q9P299 210 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 U3KQE9 123 aa13.14□□□□□ -0.31
CTSD-209ENST00000637158 M0QYG6 137 aa13.13□□□□□ -0.31
CTSD-209ENST00000637158 SLC25A4P12235 298 aa13.13□□□□□ -0.31
CTSD-209ENST00000637158 SPCS3P61009 180 aa13.13□□□□□ -0.31
CTSD-209ENST00000637158 YPEL3P61236 119 aaPredicted RBP13.13□□□□□ -0.31
CTSD-209ENST00000637158 MLANAQ16655 118 aa13.13□□□□□ -0.31
CTSD-209ENST00000637158 TIGITQ495A1 244 aa13.13□□□□□ -0.31
CTSD-209ENST00000637158 RNASE10Q5GAN6 216 aaKnown RBP13.13□□□□□ -0.31
CTSD-209ENST00000637158 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms