RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 CORTO00230 105 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 APOA1P02647 267 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 ZNF688P0C7X2 276 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 RNASE2P10153 161 aaKnown RBP13.77□□□□□ -0.21
SMN2-215ENST00000628696 OPRK1P41145 380 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 P2RY1P47900 373 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 MLANAQ16655 118 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 RNASE12Q5GAN4 147 aaKnown RBP13.77□□□□□ -0.21
SMN2-215ENST00000628696 MORN3Q6PF18 240 aaPredicted RBP13.77□□□□□ -0.21
SMN2-215ENST00000628696 TRPT1Q86TN4 253 aaKnown RBP13.77□□□□□ -0.21
SMN2-215ENST00000628696 NARS2Q96I59 477 aaKnown RBP13.77□□□□□ -0.21
SMN2-215ENST00000628696 DNAH6Q9C0G6 4158 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 HRH4Q9H3N8 390 aa13.77□□□□□ -0.21
SMN2-215ENST00000628696 MRPL36Q9P0J6 103 aaKnown RBP13.77□□□□□ -0.21
SMN2-215ENST00000628696 HECTD4Q9Y4D8 3996 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 CLN5O75503 358 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 SPP1P10451 314 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 MIFP14174 115 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 PIGPP57054 158 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 TMEM41BQ5BJD5 291 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 GRAMD2BQ96HH9 432 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 TP53RKQ96S44 253 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 CLEC5AQ9NY25 188 aa13.76□□□□□ -0.21
SMN2-215ENST00000628696 INS-IGF2F8WCM5 200 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 SCGB2A1O75556 95 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 ATG12O94817 140 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 ELK1P19419 428 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 C4BPBP20851 252 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 CRYBB3P26998 211 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 RND3P61587 244 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 TRIM16LQ309B1 348 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 TIGITQ495A1 244 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 Q6ZTC4 211 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 RNASE11Q8TAA1 199 aaKnown RBP13.75□□□□□ -0.21
SMN2-215ENST00000628696 FNDC4Q9H6D8 234 aaPredicted RBP13.75□□□□□ -0.21
SMN2-215ENST00000628696 VCX3AQ9NNX9 186 aa13.75□□□□□ -0.21
SMN2-215ENST00000628696 IGHV4-4A0A075B6R2 117 aa13.74□□□□□ -0.21
SMN2-215ENST00000628696 ELOA3CA0A087WX78 387 aaPredicted RBP13.74□□□□□ -0.21
SMN2-215ENST00000628696 TRAV10A0A0B4J240 114 aa13.74□□□□□ -0.21
SMN2-215ENST00000628696 HPGDSO60760 199 aa13.74□□□□□ -0.21
SMN2-215ENST00000628696 P0C879 139 aa13.74□□□□□ -0.21
SMN2-215ENST00000628696 SP6Q3SY56 376 aa13.74□□□□□ -0.21
SMN2-215ENST00000628696 PVRIGQ6DKI7 326 aa13.74□□□□□ -0.21
SMN2-215ENST00000628696 OR4X1Q8NH49 305 aa13.74□□□□□ -0.21
SMN2-215ENST00000628696 ZNF486Q96H40 463 aaPredicted RBP13.74□□□□□ -0.21
SMN2-215ENST00000628696 C3orf85A0A1B0GTC6 90 aa13.73□□□□□ -0.21
SMN2-215ENST00000628696 ZNF705EA8MWA4 302 aaPredicted RBP13.73□□□□□ -0.21
SMN2-215ENST00000628696 NCS1P62166 190 aa13.73□□□□□ -0.21
SMN2-215ENST00000628696 DHRS2Q13268 280 aa13.73□□□□□ -0.21
SMN2-215ENST00000628696 RNASE10Q5GAN6 216 aaKnown RBP13.73□□□□□ -0.21
SMN2-215ENST00000628696 RRNAD1Q96FB5 475 aaKnown RBP13.73□□□□□ -0.21
SMN2-215ENST00000628696 COPZ2Q9P299 210 aa13.73□□□□□ -0.21
SMN2-215ENST00000628696 TBC1D24Q9ULP9 559 aa13.73□□□□□ -0.21
SMN2-215ENST00000628696 X6R8D5 127 aa13.73□□□□□ -0.21
SMN2-215ENST00000628696 FAM25AB3EWG3 89 aa13.72□□□□□ -0.21
SMN2-215ENST00000628696 FAM25CB3EWG5 89 aa13.72□□□□□ -0.21
SMN2-215ENST00000628696 FAM25GB3EWG6 89 aa13.72□□□□□ -0.21
SMN2-215ENST00000628696 EIF2B2P49770 351 aaKnown RBP13.72□□□□□ -0.21
SMN2-215ENST00000628696 DCANP1Q8TF63 244 aa13.72□□□□□ -0.21
SMN2-215ENST00000628696 TRAV30A0A087WSZ9 112 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 A0A087WXM4 84 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 A0A0G2JRQ6 117 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 IGKV1-17P01599 117 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 CD3DP04234 171 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 RPL5P46777 297 aaKnown RBP13.71□□□□□ -0.21
SMN2-215ENST00000628696 VBP1P61758 197 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 PSMG4Q5JS54 123 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 ZNF767PQ75MW2 155 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 LHFPL1Q86WI0 220 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 CCDC71LQ8N9Z2 235 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 RAB40CQ96S21 281 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 KLK11Q9UBX7 282 aa13.71□□□□□ -0.21
SMN2-215ENST00000628696 RPS10-NUDT3A0A1W2PQS6 291 aa13.7□□□□□ -0.22
SMN2-215ENST00000628696 HELTA6NFD8 242 aa13.7□□□□□ -0.22
SMN2-215ENST00000628696 ZFAND1Q8TCF1 268 aa13.7□□□□□ -0.22
SMN2-215ENST00000628696 Q8WTZ3 238 aa13.7□□□□□ -0.22
SMN2-215ENST00000628696 DEFB131BA0A096LNP1 70 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 C12orf74Q32Q52 190 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 Q6ZRM9 215 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 ARRDC1Q8N5I2 433 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 CSNK1G2-AS1Q8NCQ2 148 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 OR52I2Q8NH67 350 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 RNF126Q9BV68 326 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 HEYLQ9NQ87 328 aaPredicted RBP13.69□□□□□ -0.22
SMN2-215ENST00000628696 CELA1Q9UNI1 258 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 U3KQE9 123 aa13.69□□□□□ -0.22
SMN2-215ENST00000628696 HNRNPCP07910 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMN2-215ENST00000628696 UCP1P25874 307 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 HTR2BP41595 481 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 RND2P52198 227 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 AP2S1P53680 142 aaPredicted RBP13.68□□□□□ -0.22
SMN2-215ENST00000628696 SPCS3P61009 180 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 BSXQ3C1V8 233 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 SCGB2B2Q4G0G5 96 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 MZT2AQ6P582 158 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 C16orf54Q6UWD8 224 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 LINC00336Q6ZUF6 198 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 OR1S2Q8NGQ3 325 aa13.68□□□□□ -0.22
SMN2-215ENST00000628696 OR13C8Q8NGS7 320 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms