RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SIGLEC9Q9Y336 463 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 RBM7Q9Y580 266 aaKnown RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 LOC102723971A0A1B0GUV8 181 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 IGSF23A1L1A6 192 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 FNDC10F2Z333 226 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 RAB29O14966 203 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 PPP1R2P9O14990 202 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 SSSCA1O60232 199 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 EIF3GO75821 320 aaKnown RBP eCLIP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 IFNA10P01566 189 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 BCL2P10415 239 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 CNTFRP26992 372 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 MC5RP33032 325 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 KIR2DS2P43631 304 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 RPS10P46783 165 aaKnown RBP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 BRWD1-AS2P59051 145 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 KRTAP10-3P60369 221 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 RPL30P62888 115 aaKnown RBP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 BLCAPP62952 87 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 DLK1P80370 383 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 FABP9Q0Z7S8 132 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 EIF4EBP1Q13541 118 aaPredicted RBP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 ICAM4Q14773 271 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 TMEM241Q24JQ0 296 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 AARDQ4LEZ3 155 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 HIST2H2BDQ6DRA6 164 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 TREML4Q6UXN2 200 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 MOB3BQ86TA1 216 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 NDUFA11Q86Y39 141 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 TGIF2LXQ8IUE1 241 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 FAM24BQ8N5W8 94 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF645Q8N7E2 425 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF709Q8N972 641 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 OR4F17Q8NGA8 305 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 OR10P1Q8NGE3 313 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 OR2T10Q8NGZ9 312 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 RCC1LQ96I51 464 aaKnown RBP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 EAF1Q96JC9 268 aaPredicted RBP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 YPEL4Q96NS1 127 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 OR4F4Q96R69 305 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 GPHA2Q96T91 129 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 ACTR3CQ9C0K3 210 aaPredicted RBP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 WDR61Q9GZS3 305 aaKnown RBP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 WNT10AQ9GZT5 417 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF702PQ9H963 129 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 SDF2L1Q9HCN8 221 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 SLC39A9Q9NUM3 307 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 HSPB7Q9UBY9 170 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 NAT8Q9UHE5 227 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 MOB4Q9Y3A3 225 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 DMRT1Q9Y5R6 373 aa4.16□□□□□ -1.74
SHMT1-211ENST00000618902 PUS1Q9Y606 427 aaKnown RBP eCLIP4.16□□□□□ -1.74
SHMT1-211ENST00000618902 TRAV9-1A0A075B6T8 112 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 CTXND1A0A1B0GTU2 59 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 LINC01548A6NM66 108 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 LINC00473A8K010 186 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 H0YJW9 148 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 M0R1X1 148 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 RBFOX2O43251 390 aaKnown RBP eCLIP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 PDE6DO43924 150 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 MOSP00540 346 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 IGKV1D-33P01593 117 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 IGKV1-33P01594 117 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 FABP1P07148 127 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 OR13C7P0DN81 318 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 VDAC2P45880 294 aaPredicted RBP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 SLC35B1P78383 322 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 KIAA0141Q14154 515 aaPredicted RBP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 ELOBQ15370 118 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 VWC2Q2TAL6 325 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 ACOT6Q3I5F7 207 aaPredicted RBP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM95Q3KNT9 176 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 PDLIM3Q53GG5 364 aaPredicted RBP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 KCNIP4Q6PIL6 250 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM14EPQ6UXP3 125 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 REC114Q7Z4M0 266 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 LILRB2Q8N423 598 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 OR4X2Q8NGF9 303 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 OR51H1Q8NH63 302 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 RNASEH2CQ8TDP1 164 aaKnown RBP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 WIPF2Q8TF74 440 aaPredicted RBP4.15□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM190Q8WZ59 177 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 DDB2Q92466 427 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 ACY3Q96HD9 319 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 OR5B12Q96R08 314 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 S1PR3Q99500 378 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 PYGO2Q9BRQ0 406 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM147Q9BVK8 224 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 KRTAP3-3Q9BYR6 98 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 KRTAP3-2Q9BYR7 98 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 OR2D2Q9H210 308 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 SRD5A3Q9H8P0 318 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 RPRMQ9NS64 109 aa4.15□□□□□ -1.75
SHMT1-211ENST00000618902 SRRM4A7MD48 611 aaKnown RBP4.14□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF727A8MUV8 499 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 F6UZH7 168 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 CST7O76096 145 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 KBTBD11O94819 623 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 MT-CO2P00403 227 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms