RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SPSB3Q6PJ21 355 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 RPP25LQ8N5L8 163 aaKnown RBP7.06□□□□□ -1.28
CCDC47-207ENST00000612558 OR10G4Q8NGN3 311 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 OR10G9Q8NGN4 311 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 OR10G7Q8NGN6 311 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 ARPC1AQ92747 370 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 RCC1LQ96I51 464 aaKnown RBP7.06□□□□□ -1.28
CCDC47-207ENST00000612558 FAM210AQ96ND0 272 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 SSX3Q99909 188 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 ACTR3CQ9C0K3 210 aaPredicted RBP7.06□□□□□ -1.28
CCDC47-207ENST00000612558 FNDC4Q9H6D8 234 aaPredicted RBP7.06□□□□□ -1.28
CCDC47-207ENST00000612558 SLC39A9Q9NUM3 307 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 FASNP49327 2511 aaKnown RBP7.06□□□□□ -1.28
CCDC47-207ENST00000612558 CCDC168Q8NDH2 2452 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 IGHV7-81A0A0B4J1V7 117 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 A0A1B0GV50 99 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 CRYGCP07315 174 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 CTRB1P17538 263 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 ZP3P21754 424 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 MFAP2P55001 183 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 SRSF3P84103 164 aaKnown RBP7.05□□□□□ -1.28
CCDC47-207ENST00000612558 ZNF726P1Q15940 193 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 MIC13Q5XKP0 118 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 CTRB2Q6GPI1 263 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 BPIFCQ8NFQ6 507 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 OR2T6Q8NHC8 308 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 PIFOQ8TCI5 191 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 RBM14Q96PK6 669 aaKnown RBP7.05□□□□□ -1.28
CCDC47-207ENST00000612558 PBDC1Q9BVG4 233 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 WNT10AQ9GZT5 417 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 SLC45A2Q9UMX9 530 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 PXMP4Q9Y6I8 212 aa7.05□□□□□ -1.28
CCDC47-207ENST00000612558 IGKV1OR2-108A0A075B7D4 117 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 CTXND1A0A1B0GTU2 59 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 NPIPB5A8MRT5 1133 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 YIF1AO95070 293 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 CD5P06127 495 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 DEFA4P12838 97 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 B2MP61769 119 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 CCL20P78556 96 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 PEA15Q15121 130 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 GUK1Q16774 197 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 CYB5R2Q6BCY4 276 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 LCN15Q6UWW0 184 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 TTC9CQ8N5M4 171 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 STPG3Q8N7X2 389 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 C22orf15Q8WYQ4 148 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 NPIPB3Q92617 1050 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 ACY3Q96HD9 319 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 NARS2Q96I59 477 aaKnown RBP7.04□□□□□ -1.28
CCDC47-207ENST00000612558 LINC00052Q96N35 136 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 SLC25A33Q9BSK2 321 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 FAM103A1Q9BTL3 118 aaKnown RBP7.04□□□□□ -1.28
CCDC47-207ENST00000612558 TREM1Q9NP99 234 aa7.04□□□□□ -1.28
CCDC47-207ENST00000612558 A0A1W2PPV4 95 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 TMEM218A2RU14 115 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 MAP1LC3B2A6NCE7 125 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SEC14L6B5MCN3 397 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 MT-CO2P00403 227 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 OR10J1P30954 320 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 NDPQ00604 133 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 ASPHD1Q5U4P2 390 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 FAM122CQ6P4D5 195 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 C19orf35Q6ZS72 473 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SSX7Q7RTT5 188 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 C5orf56Q8N8D9 126 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 THAP8Q8NA92 274 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 TMEM116Q8NCL8 245 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 NANPQ8TBE9 248 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 RAB24Q969Q5 203 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SCRT1Q9BWW7 348 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 MAP1LC3BQ9GZQ8 125 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 EIF5A2Q9GZV4 153 aaKnown RBP7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SMDT1Q9H4I9 107 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 TMEM231Q9H6L2 316 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 PITPNC1Q9UKF7 332 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 MOB4Q9Y3A3 225 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 DMRT1Q9Y5R6 373 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 GCN1Q92616 2671 aaKnown RBP7.03□□□□□ -1.28
CCDC47-207ENST00000612558 H3BUX3 64 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 I3L2K1 104 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 LINC00869P0C866 280 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 EGR2P11161 476 aaPredicted RBP7.03□□□□□ -1.28
CCDC47-207ENST00000612558 CDC34P49427 236 aaPredicted RBP7.03□□□□□ -1.28
CCDC47-207ENST00000612558 RND2P52198 227 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 FGF8P55075 233 aaPredicted RBP7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SELENOTP62341 195 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 PMS2P11Q13670 270 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 ZNF124Q15973 351 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 GCSAMLQ5JQS6 135 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 CYP2G1PQ6ZSU1 146 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 WFDC11Q8NEX6 87 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SGMS2Q8NHU3 365 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 TMEM68Q96MH6 324 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 FOXC2Q99958 501 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 HSPB9Q9BQS6 159 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SLC25A22Q9H936 323 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 MRPL36Q9P0J6 103 aaKnown RBP7.03□□□□□ -1.28
CCDC47-207ENST00000612558 SOX21Q9Y651 276 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms