RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 DOLPP1Q86YN1 238 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR51H1Q8NH63 302 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR9G1Q8NH87 305 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 LMX1AQ8TE12 382 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 CT55Q8WUE5 264 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 LRRC29Q8WV35 223 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 DDB2Q92466 427 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 GALMQ96C23 342 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 PERPQ96FX8 193 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPAG8Q99932 426 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 EMC6Q9BV81 110 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 GGTLC1Q9BX51 225 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 TM2D2Q9BX73 214 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 GFRA4Q9GZZ7 299 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 SH2D2AQ9NP31 389 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 HRASLS2Q9NWW9 162 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 TSSC4Q9Y5U2 329 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 WNT6Q9Y6F9 365 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 SEC16AO15027 2179 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 LRP4O75096 1905 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 USF3Q68DE3 2245 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 LOC102724200A0A096LPH7 203 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A1W2PRD5 423 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A1W2PRF3 423 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A1W2PRM7 423 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 C10orf142B7Z368 130 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 TMEM150CB9EJG8 249 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 F5H5K5 113 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 LINC01619G3V211 115 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 RRHO14718 337 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 DNPH1O43598 174 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 SYNGR1O43759 233 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 HLA-DRB4P13762 266 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 PVRP15151 417 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 GCSHP23434 173 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 VDAC2P45880 294 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 GPR12P47775 334 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 MLF1P58340 268 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 ERVK11-1P61568 191 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 RPL24P83731 157 aaKnown RBP3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 MEF2CQ06413 473 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 KLRD1Q13241 179 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 ESPL1Q14674 2120 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 EFNB3Q15768 340 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 CENPWQ5EE01 88 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 DMRTC1Q5HYR2 192 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 PRAMEF5Q5TYX0 476 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 PRAMEF6Q5VXH4 476 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 DHRS13Q6UX07 377 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 KIR3DL3Q8N743 410 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 SMRP1Q8NCR6 262 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 NUP35Q8NFH5 326 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 PHLDA1Q8WV24 401 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 TSACCQ96A04 125 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 ADTRPQ96IZ2 230 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 RITA1Q96K30 269 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 C1QTNF5Q9BXJ0 243 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 PKIBQ9C010 78 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 PRSS22Q9GZN4 317 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 WDR54Q9H977 334 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 TMEM140Q9NV12 185 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 OBP2AQ9NY56 170 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR1A1Q9P1Q5 309 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 KLF12Q9Y4X4 402 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 LINC00312Q9Y6C7 94 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 R4GN57 208 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 HLA-DRB4X5D2U9 266 aa3.3□□□□□ -1.88
HMGB1P50-201ENST00000605814 GON4LQ3T8J9 2241 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 HCFC1P51610 2035 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 TANC2Q9HCD6 1990 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 TRBV7-9A0A0J9YWB2 115 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 TEX50A0A1B0GTY4 177 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A1B0GW15 77 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF716A6NP11 495 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 SRRM4A7MD48 611 aaKnown RBP3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 A8MWL6 223 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 TNFSF12O43508 249 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZG16O60844 167 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 NXPH3O95157 252 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 APOA2P02652 100 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 MYF5P13349 255 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 FOLR3P41439 243 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 CSN1S1P47710 185 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 MFAP2P55001 183 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 EDDM3BP56851 147 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 PCBD1P61457 104 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 RPL8P62917 257 aaKnown RBP3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 AESQ08117 197 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 CATR1Q13166 79 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 IZUMO4Q1ZYL8 232 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 CEACAM16Q2WEN9 425 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 LYSMD4Q5XG99 296 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 RNASEKQ6P5S7 137 aaKnown RBP3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 Q6Q795 121 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 SSX8Q7RTT4 187 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZADH2Q8N4Q0 377 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 DRAM1Q8N682 238 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms