RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 AKR1C2P52895 323 aa12.99□□□□□ -0.33
SHKBP1-227ENST00000602011 LILRB2Q8N423 598 aa12.99□□□□□ -0.33
SHKBP1-227ENST00000602011 TMEM230Q96A57 120 aa12.99□□□□□ -0.33
SHKBP1-227ENST00000602011 RRNAD1Q96FB5 475 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-227ENST00000602011 C3orf85A0A1B0GTC6 90 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 RPS10-NUDT3A0A1W2PQS6 291 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 HELTA6NFD8 242 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 K7EQG2 157 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 APOHP02749 345 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 P0C879 139 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 TGFBR1P36897 503 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 ALDH3B2P48448 385 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 PIGPP57054 158 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 LSM3P62310 102 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 PRR20EP86478 221 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 PRR20CP86479 221 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 PRR20DP86480 221 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 PRR20BP86481 221 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 PRR20AP86496 221 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 RNASE10Q5GAN6 216 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 LEMD1Q68G75 181 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 MZT2AQ6P582 158 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 GPR141Q7Z602 305 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 LHFPL1Q86WI0 220 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 SNX29P2Q8IUI4 249 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 FAM219AQ8IW50 185 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 CCDC71LQ8N9Z2 235 aa12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 SEPSECSQ9HD40 501 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-227ENST00000602011 RYR1P21817 5038 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 A0A1B0GU03 582 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 ZNF705EA8MWA4 302 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 IGKV1-5P01602 117 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 RNASE2P10153 161 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 RORCP51449 518 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 TRPT1Q86TN4 253 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 Q8NAQ8 132 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 COPZ2Q9P299 210 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 APLNQ9ULZ1 77 aa12.97□□□□□ -0.33
SHKBP1-227ENST00000602011 TRAV10A0A0B4J240 114 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 IGLL5B9A064 214 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 OPRK1P41145 380 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 ETV6P41212 452 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 HTR2BP41595 481 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 P2RY1P47900 373 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 HOXA1P49639 335 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 SPCS3P61009 180 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 TERB2Q8NHR7 220 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 Q8WTZ3 238 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 AP3S1Q92572 193 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
SHKBP1-227ENST00000602011 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 SLC25A4P12235 298 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 ELK1P19419 428 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 UCP1P25874 307 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 TRIM16LQ309B1 348 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 BSXQ3C1V8 233 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 AARDQ4LEZ3 155 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 NOXA1Q86UR1 476 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 TP53RKQ96S44 253 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 C1QTNF4Q9BXJ3 329 aa12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-227ENST00000602011 M0QYG6 137 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 DEFB4AO15263 64 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 ETFRF1Q6IPR1 90 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 LINC00336Q6ZUF6 198 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 OR1S2Q8NGQ3 325 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 RNASE11Q8TAA1 199 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 RNASEH2CQ8TDP1 164 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 DCANP1Q8TF63 244 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 ABHD1Q96SE0 405 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 MTFP1Q9UDX5 166 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 U3KQE9 123 aa12.94□□□□□ -0.34
SHKBP1-227ENST00000602011 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 FAM25AB3EWG3 89 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 FAM25CB3EWG5 89 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 FAM25GB3EWG6 89 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 GIG44P09565 113 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 HLA-DMBP28068 263 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 IZUMO4Q1ZYL8 232 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 SPINK9Q5DT21 86 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 FAM24BQ8N5W8 94 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 RNF126Q9BV68 326 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 FNDC4Q9H6D8 234 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 KLK11Q9UBX7 282 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 TBC1D24Q9ULP9 559 aa12.93□□□□□ -0.34
SHKBP1-227ENST00000602011 HPGDSO60760 199 aa12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 CDS2O95674 445 aa12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 IGKV1-17P01599 117 aa12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 CD3DP04234 171 aa12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 HNRNPCP07910 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 RBMY1A1P0DJD3 496 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 RBMY1CP0DJD4 496 aa12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 TAS2R19P59542 299 aa12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 SNRPD3P62318 126 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 SSBP1Q04837 148 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-227ENST00000602011 RBMY1FQ15415 496 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms