RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
HERC3-214ENST00000601319 TMED4Q7Z7H5 227 aa12.89□□□□□ -0.35
HERC3-214ENST00000601319 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
HERC3-214ENST00000601319 HEYLQ9NQ87 328 aaPredicted RBP12.89□□□□□ -0.35
HERC3-214ENST00000601319 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
HERC3-214ENST00000601319 HSPB7Q9UBY9 170 aa12.89□□□□□ -0.35
HERC3-214ENST00000601319 NAP1L6A6NFF2 107 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 TSPAN4O14817 238 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
HERC3-214ENST00000601319 OPRK1P41145 380 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 RBMS2Q15434 407 aaKnown RBP12.88□□□□□ -0.35
HERC3-214ENST00000601319 HAGHQ16775 308 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 C2orf83Q53S99 150 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 LRTM2Q8N967 370 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 SLC24A4Q8NFF2 622 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 OR52B4Q8NGK2 314 aa12.88□□□□□ -0.35
HERC3-214ENST00000601319 RNASEH2CQ8TDP1 164 aaKnown RBP12.88□□□□□ -0.35
HERC3-214ENST00000601319 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
HERC3-214ENST00000601319 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 CEBPZOSA8MTT3 80 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 UBE2MP61081 183 aaKnown RBP12.87□□□□□ -0.35
HERC3-214ENST00000601319 TNFRSF9Q07011 255 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 BAK1Q16611 211 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 CENPSQ8N2Z9 138 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 SPATA25Q9BR10 227 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 GINS3Q9BRX5 216 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 WFDC10AQ9H1F0 79 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 SMPXQ9UHP9 88 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
HERC3-214ENST00000601319 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 A0A1B0GU03 582 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 RPS10-NUDT3A0A1W2PQS6 291 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 CLN5O75503 358 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 SCGB2A1O75556 95 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 TMEM50AO95807 157 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 VAMP1P23763 118 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 INPP1P49441 399 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 NOXA1Q86UR1 476 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 DEFB125Q8N687 156 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 SDHCQ99643 169 aaPredicted RBP12.86□□□□□ -0.35
HERC3-214ENST00000601319 HIPK2Q9H2X6 1198 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 SRD5A3Q9H8P0 318 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 ZFAND3Q9H8U3 227 aa12.86□□□□□ -0.35
HERC3-214ENST00000601319 MRPL36Q9P0J6 103 aaKnown RBP12.86□□□□□ -0.35
HERC3-214ENST00000601319 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
HERC3-214ENST00000601319 YIF1AO95070 293 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 SLC25A4P12235 298 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 SLC25A6P12236 298 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 NPY1RP25929 384 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 PPP1R1AQ13522 171 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 TMEM170AQ8WVE7 144 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
HERC3-214ENST00000601319 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 TRAV14DV4A0A0A6YYC5 116 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
HERC3-214ENST00000601319 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
HERC3-214ENST00000601319 CHEK1O14757 476 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 PITX3O75364 302 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 NDUFB6O95139 128 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 SFT2D2O95562 160 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
HERC3-214ENST00000601319 ATP5IP56385 69 aaPredicted RBP12.84□□□□□ -0.35
HERC3-214ENST00000601319 FAM110AQ9BQ89 295 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 C7orf50Q9BRJ6 194 aaKnown RBP12.84□□□□□ -0.35
HERC3-214ENST00000601319 RHPN1-AS1Q9BWJ2 59 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 PUS1Q9Y606 427 aaKnown RBP eCLIP12.84□□□□□ -0.35
HERC3-214ENST00000601319 U3KQ87 197 aa12.84□□□□□ -0.35
HERC3-214ENST00000601319 OR4C46A6NHA9 309 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 NXPH3O95157 252 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 CD5P06127 495 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 IL7P13232 177 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 BMI1P35226 326 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 ETFRF1Q6IPR1 90 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 OR1S1Q8NH92 325 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 DTD1Q8TEA8 209 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 CITED4Q96RK1 184 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 RBKSQ9H477 322 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 TMED3Q9Y3Q3 217 aa12.83□□□□□ -0.36
HERC3-214ENST00000601319 CENPXA8MT69 81 aa12.82□□□□□ -0.36
HERC3-214ENST00000601319 FAM90A26D6RGX4 464 aa12.82□□□□□ -0.36
HERC3-214ENST00000601319 IGKV1-17P01599 117 aa12.82□□□□□ -0.36
HERC3-214ENST00000601319 PRSS54Q6PEW0 395 aa12.82□□□□□ -0.36
HERC3-214ENST00000601319 RNF2Q99496 336 aa12.82□□□□□ -0.36
HERC3-214ENST00000601319 VSIRQ9H7M9 311 aa12.82□□□□□ -0.36
HERC3-214ENST00000601319 IGLC1P0CG04 106 aa12.81□□□□□ -0.36
HERC3-214ENST00000601319 BTCP35070 178 aa12.81□□□□□ -0.36
HERC3-214ENST00000601319 RND2P52198 227 aa12.81□□□□□ -0.36
HERC3-214ENST00000601319 MLANAQ16655 118 aa12.81□□□□□ -0.36
HERC3-214ENST00000601319 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
HERC3-214ENST00000601319 FAM90A2PQ658T7 463 aa12.81□□□□□ -0.36
HERC3-214ENST00000601319 LINC00299Q6ZSB3 139 aa12.81□□□□□ -0.36
HERC3-214ENST00000601319 OR1S2Q8NGQ3 325 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms