RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 VAMP1P23763 118 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 CD81P60033 236 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 MLANAQ16655 118 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 C2orf83Q53S99 150 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 CENPSQ8N2Z9 138 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 OR10C1Q96KK4 312 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 C20orf24Q9BUV8 137 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 HIPK2Q9H2X6 1198 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 SELENOKQ9Y6D0 94 aa10.12□□□□□ -0.79
ARHGEF1-222ENST00000600517 PITX3O75364 302 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 YIF1AO95070 293 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 SFT2D2O95562 160 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 IL7P13232 177 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 UBE2MP61081 183 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 TNFRSF9Q07011 255 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 PPP1R1AQ13522 171 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 ANKRD55Q3KP44 614 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 LINC00322Q6ZN03 302 aaPredicted RBP10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 OR4X1Q8NH49 305 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 TMEM170AQ8WVE7 144 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 C7orf50Q9BRJ6 194 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 TUBA4BQ9H853 241 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 MRPL36Q9P0J6 103 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 SMPXQ9UHP9 88 aa10.11□□□□□ -0.79
ARHGEF1-222ENST00000600517 IGHV3OR16-8A0A075B7F1 116 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 CENPXA8MT69 81 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 ZNF207O43670 478 aaKnown RBP10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 CLN5O75503 358 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 SCAF4O95104 1147 aaKnown RBP10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 SLC25A6P12236 298 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 OPRK1P41145 380 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 TOMM20LQ6UXN7 152 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 LINC00299Q6ZSB3 139 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 SLC16A13Q7RTY0 426 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 NOXA1Q86UR1 476 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 OR1S1Q8NH92 325 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 WWC2-AS2Q96NR7 200 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 TM2D3Q9BRN9 247 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 RBKSQ9H477 322 aa10.1□□□□□ -0.79
ARHGEF1-222ENST00000600517 TRAV14DV4A0A0A6YYC5 116 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 IGHV7-4-1A0A0J9YVY3 117 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 RPS10-NUDT3A0A1W2PQS6 291 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 A6NHS1 94 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 OR11H12B2RN74 326 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 TSPAN4O14817 238 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 NXPH3O95157 252 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 ATP5IP56385 69 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 HAGHQ16775 308 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 LAMTOR1Q6IAA8 161 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 ZNF600Q6ZNG1 722 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 DEFB125Q8N687 156 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 TMEM116Q8NCL8 245 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 OR52B4Q8NGK2 314 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 DTD1Q8TEA8 209 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 SPAG8Q99932 426 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 RHPN1-AS1Q9BWJ2 59 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 TMED3Q9Y3Q3 217 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 U3KQ87 197 aa10.09□□□□□ -0.79
ARHGEF1-222ENST00000600517 NBEAL2Q6ZNJ1 2754 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 TRAV30A0A087WSZ9 112 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 C9orf170A2RU37 121 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 CHEK1O14757 476 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 PLA2G10O15496 165 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 SLC25A4P12235 298 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 NPY1RP25929 384 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 BTCP35070 178 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 CNPY1Q3B7I2 92 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 PRSS54Q6PEW0 395 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 GINS3Q9BRX5 216 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 FLVCR2Q9UPI3 526 aa10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
ARHGEF1-222ENST00000600517 FAM90A26D6RGX4 464 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 IFNA10P01566 189 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 IGKV1-17P01599 117 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 ETFRF1Q6IPR1 90 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 RCHY1Q96PM5 261 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 RNF2Q99496 336 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 WFDC10AQ9H1F0 79 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 ZFAND3Q9H8U3 227 aa10.07□□□□□ -0.8
ARHGEF1-222ENST00000600517 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 SCGB2A1O75556 95 aa10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 HOXB5P09067 269 aa10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 OR4E1P0C645 316 aa10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 RND2P52198 227 aa10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 GGNBP1Q5YKI7 109 aa10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 SRD5A3Q9H8P0 318 aa10.06□□□□□ -0.8
ARHGEF1-222ENST00000600517 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
ARHGEF1-222ENST00000600517 OR4C46A6NHA9 309 aa10.05□□□□□ -0.8
ARHGEF1-222ENST00000600517 LYRM1O43325 122 aa10.05□□□□□ -0.8
ARHGEF1-222ENST00000600517 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF1-222ENST00000600517 CD5P06127 495 aa10.05□□□□□ -0.8
ARHGEF1-222ENST00000600517 IGLC1P0CG04 106 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms